{ "type": "genome", "identifier": "GCA_905480495.1", "organism": "uncultured Puniceicoccaceae bacterium", "title": "uncultured Puniceicoccaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY", "publication": [ {} ], "properties": { "assembly_accession": "GCA_905480495.1", "bioproject": "PRJEB38290", "biosample": "SAMEA8498580", "wgs_master": "CAJQQU000000000.1", "refseq_category": "na", "taxid": "1101446", "species_taxid": "1101446", "organism_name": "uncultured Puniceicoccaceae bacterium", "infraspecific_name": "", "isolate": "3_20180522_Bin_METABAT_50_1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/15", "asm_name": "3_20180522_Bin_METABAT_50_1", "submitter": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/480/495/GCA_905480495.1_3_20180522_Bin_METABAT_50_1", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-15", "dateModified": "2021-04-15", "datePublished": "2021-04-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Puniceicoccaceae bacterium" ], "sample_taxid": [ "1101446" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "North Sea" ], "sample_host_location_id": [], "data_size": "0.546 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 92.59, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, 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78.4845, "matched_fragments": 205, "total_fragments": 540, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__DSM-45221;g__BACL24", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002292345.1", "gtdb_species": "s__BACL24 sp002292345", "ani": 78.3993, "matched_fragments": 176, "total_fragments": 540, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__DSM-45221;g__BACL24", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.51", "min_intra_species_ani": "99.36", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCA_003503355.1", "gtdb_species": "s__BACL24 sp003503355", "ani": 77.4279, "matched_fragments": 116, "total_fragments": 540, 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Verrucomicrobiota", "c__Verrucomicrobiae", "o__Opitutales", "f__Coraliomargaritaceae", "g__Lentimonas", "s__Lentimonas sp017857255" ], "_genome_taxon": [ "uncultured", "Puniceicoccaceae", "bacterium", "d__Bacteria", "p__Verrucomicrobiota", "c__Verrucomicrobiae", "o__Opitutales", "f__Coraliomargaritaceae", "g__Lentimonas", "s__Lentimonas sp017857255", "Bacteria", "Verrucomicrobiota", "Verrucomicrobiae", "Opitutales", "Coraliomargaritaceae", "Lentimonas", "Lentimonas", "sp017857255" ], "_meo": [ { "id": "MEO_0000041", "label": "marine water" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }