{
    "type": "genome",
    "identifier": "GCA_913045335.1",
    "organism": "uncultured Candidatus Microthrix sp.",
    "title": "uncultured Candidatus Microthrix sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_913045335.1",
        "bioproject": "PRJEB37807",
        "biosample": "SAMEA9695339",
        "wgs_master": "CAJWPK000000000.1",
        "refseq_category": "na",
        "taxid": "349275",
        "species_taxid": "349275",
        "organism_name": "uncultured Candidatus Microthrix sp.",
        "infraspecific_name": "",
        "isolate": "ERR599031_bin.43_MetaBAT_v2.12.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/22",
        "asm_name": "ERR599031_bin.43_MetaBAT_v2.12.1_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/913/045/335/GCA_913045335.1_ERR599031_bin.43_MetaBAT_v2.12.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-22",
    "dateModified": "2021-09-22",
    "datePublished": "2021-09-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Candidatus Microthrix sp."
        ],
        "sample_taxid": [
            "349275"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.563 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2016349",
        "Number of Sequences": "49",
        "Longest Sequences (bp)": "356203",
        "N50 (bp)": "92046",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.5",
        "Number of CDSs": "1927",
        "Average Protein Length": "321.1",
        "Coding Ratio (%)": "92.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Rhabdothermincola salaria",
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                "accession": "GCA_021246445.1",
                "taxid": 2903142,
                "species_taxid": 2903142,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 129,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomarinicola tropica",
                "strain": "strain=SCSIO 58843",
                "accession": "GCA_009650215.1",
                "taxid": 2789776,
                "species_taxid": 2789776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6811,
                "matched_fragments": 126,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhabdothermincola sediminis",
                "strain": "strain=SYSU G02662",
                "accession": "GCA_014805525.1",
                "taxid": 2751370,
                "species_taxid": 2751370,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4597,
                "matched_fragments": 90,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desertimonas flava",
                "strain": "strain=SYSU D60003",
                "accession": "GCA_003426815.1",
                "taxid": 2064846,
                "species_taxid": 2064846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3089,
                "matched_fragments": 91,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter fluminis",
                "strain": "strain=DSM 18936",
                "accession": "GCA_004364865.1",
                "taxid": 467091,
                "species_taxid": 467091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.223,
                "matched_fragments": 88,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter coccineus",
                "strain": "strain=YM16-304",
                "accession": "GCA_000348785.1",
                "taxid": 467094,
                "species_taxid": 467094,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0337,
                "matched_fragments": 68,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter nonamiensis",
                "strain": "strain=YM16-303",
                "accession": "GCA_000350145.1",
                "taxid": 467093,
                "species_taxid": 467093,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9787,
                "matched_fragments": 57,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomycetospora succinea",
                "strain": "strain=DSM 45775",
                "accession": "GCA_004363095.1",
                "taxid": 663603,
                "species_taxid": 663603,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3205,
                "matched_fragments": 53,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002687745.1",
                "gtdb_species": "s__UBA3125 sp002687745",
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                "matched_fragments": 560,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.98",
                "min_intra_species_ani": "96.61",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002501135.1",
                "gtdb_species": "s__UBA3125 sp002501135",
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                "matched_fragments": 494,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.79",
                "min_intra_species_ani": "99.79",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018673475.1",
                "gtdb_species": "s__UBA3125 sp018673475",
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                "matched_fragments": 557,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.93",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 16,
                "status": "-"
            },
            {
                "accession": "GCA_002365325.1",
                "gtdb_species": "s__UBA3125 sp002365325",
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                "matched_fragments": 454,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
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                "mean_intra_species_ani": "98.82",
                "min_intra_species_ani": "97.98",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_014381745.1",
                "gtdb_species": "s__UBA3125 sp014381745",
                "ani": 81.7325,
                "matched_fragments": 486,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.86",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_015658775.1",
                "gtdb_species": "s__UBA3125 sp015658775",
                "ani": 79.1889,
                "matched_fragments": 314,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__MedAcidi-G1;g__UBA3125",
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                "min_intra_species_ani": "98.89",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__MedAcidi-G1",
        "g__UBA3125",
        "s__UBA3125 sp002687745"
    ],
    "_genome_taxon": [
        "uncultured",
        "Candidatus",
        "Microthrix",
        "sp.",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__MedAcidi-G1",
        "g__UBA3125",
        "s__UBA3125 sp002687745",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Acidimicrobiales",
        "MedAcidi-G1",
        "UBA3125",
        "UBA3125",
        "sp002687745"
    ],
    "_meo": [
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}