{
    "type": "genome",
    "identifier": "GCA_913049865.1",
    "organism": "uncultured Synechococcus sp.",
    "title": "uncultured Synechococcus sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_913049865.1",
        "bioproject": "PRJEB37807",
        "biosample": "SAMEA9694915",
        "wgs_master": "CAJWYY000000000.1",
        "refseq_category": "na",
        "taxid": "154535",
        "species_taxid": "154535",
        "organism_name": "uncultured Synechococcus sp.",
        "infraspecific_name": "",
        "isolate": "ERR599052_bin.41_MetaBAT_v2.12.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/23",
        "asm_name": "ERR599052_bin.41_MetaBAT_v2.12.1_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/913/049/865/GCA_913049865.1_ERR599052_bin.41_MetaBAT_v2.12.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-23",
    "dateModified": "2021-09-23",
    "datePublished": "2021-09-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Synechococcus sp."
        ],
        "sample_taxid": [
            "154535"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.356 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.2,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1238082",
        "Number of Sequences": "83",
        "Longest Sequences (bp)": "72344",
        "N50 (bp)": "19788",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.2",
        "Number of CDSs": "1230",
        "Average Protein Length": "284.6",
        "Coding Ratio (%)": "84.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Parasynechococcus marenigrum",
                "strain": "strain=WH 8102",
                "accession": "GCA_000195975.1",
                "taxid": 2881428,
                "species_taxid": 2881428,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1178,
                "matched_fragments": 136,
                "total_fragments": 377,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 66.2,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003208835.1",
                "gtdb_species": "s__Synechococcus_E sp003208835",
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                "matched_fragments": 275,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.29",
                "min_intra_species_ani": "95.29",
                "mean_intra_species_af": "0.71",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 2,
                "status": "inconclusive"
            },
            {
                "accession": "GCA_016777265.1",
                "gtdb_species": "s__Synechococcus_E sp016777265",
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_000012505.1",
                "gtdb_species": "s__Synechococcus_E sp000012505",
                "ani": 88.4031,
                "matched_fragments": 357,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.61",
                "min_intra_species_ani": "95.06",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_000153805.1",
                "gtdb_species": "s__Synechococcus_E sp000153805",
                "ani": 88.076,
                "matched_fragments": 351,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000161795.2",
                "gtdb_species": "s__Synechococcus_E sp000161795",
                "ani": 77.4676,
                "matched_fragments": 147,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014279775.1",
                "gtdb_species": "s__Synechococcus_C sp002500205",
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                "matched_fragments": 74,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.03",
                "min_intra_species_ani": "97.76",
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                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCF_014279755.1",
                "gtdb_species": "s__Synechococcus_E sp014279755",
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                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013911515.1",
                "gtdb_species": "s__Synechococcus_E sp013911515",
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                "matched_fragments": 131,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014279875.1",
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                "matched_fragments": 83,
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.09",
                "min_intra_species_ani": "98.09",
                "mean_intra_species_af": "0.93",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000195975.1",
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                "matched_fragments": 137,
                "total_fragments": 377,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Synechococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
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                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_019104765.1",
                "gtdb_species": "s__Vulcanococcus sp019104765",
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                "matched_fragments": 73,
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Vulcanococcus",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014654725.1",
                "gtdb_species": "s__Vulcanococcus sp014654725",
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Vulcanococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000153045.1",
                "gtdb_species": "s__WH-5701 sp000153045",
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                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__WH-5701",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__PCC-6307",
        "f__Cyanobiaceae",
        "g__Parasynechococcus",
        "s__Parasynechococcus sp003210375"
    ],
    "_genome_taxon": [
        "uncultured",
        "Synechococcus",
        "sp.",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__PCC-6307",
        "f__Cyanobiaceae",
        "g__Parasynechococcus",
        "s__Parasynechococcus sp003210375",
        "Bacteria",
        "Cyanobacteriota",
        "Cyanobacteriia",
        "PCC-6307",
        "Cyanobiaceae",
        "Parasynechococcus",
        "Parasynechococcus",
        "sp003210375"
    ],
    "_meo": [
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}