{ "type": "genome", "identifier": "GCA_913774935.1", "organism": "uncultured Sphingomonas sp.", "title": "uncultured Sphingomonas sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY", "publication": [ {} ], "properties": { "assembly_accession": "GCA_913774935.1", "bioproject": "PRJEB45634", "biosample": "SAMEA8943758", "wgs_master": "CAJYJA000000000.1", "refseq_category": "na", "taxid": "158754", "species_taxid": "158754", "organism_name": "uncultured Sphingomonas sp.", "infraspecific_name": "", "isolate": "S2C23896_SP200", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/11", "asm_name": "S2C23896_SP200", "submitter": "INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/913/774/935/GCA_913774935.1_S2C23896_SP200", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-11", "dateModified": "2021-11-11", "datePublished": "2021-11-11", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Sphingomonas sp." ], "sample_taxid": [ "158754" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.728 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 54.17, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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"status": "below_threshold" }, { "organism_name": "Sphingomonas metalli", "strain": "strain=CGMCC 1.15330", "accession": "GCA_014641735.1", "taxid": 1779358, "species_taxid": 1779358, "relation_to_type": "type", "validated": true, "ani": 79.291, "matched_fragments": 421, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aerolata", "strain": "strain=NW12", "accession": "GCA_003046295.1", "taxid": 185951, "species_taxid": 185951, "relation_to_type": "type", "validated": true, "ani": 79.2666, "matched_fragments": 407, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas koreensis", "strain": "strain=JSS26", "accession": "GCA_002797435.1", "taxid": 93064, "species_taxid": 93064, "relation_to_type": "type", "validated": true, "ani": 79.2641, "matched_fragments": 417, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"GCA_000427645.1", "taxid": 257003, "species_taxid": 257003, "relation_to_type": "type", "validated": true, "ani": 79.1735, "matched_fragments": 423, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas panacisoli", "strain": "strain=HKS19", "accession": "GCA_007859635.1", "taxid": 1813879, "species_taxid": 1813879, "relation_to_type": "type", "validated": true, "ani": 79.1562, "matched_fragments": 377, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 79.1492, "matched_fragments": 425, "total_fragments": 850, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=DSM 100060", "accession": "GCA_011762145.1", "taxid": 1344951, "species_taxid": 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"below_threshold" } ], "cc_result": { "completeness": 54.17, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_016937575.1", "gtdb_species": "s__Sphingomonas aeriglobus", "ani": 87.3124, "matched_fragments": 726, "total_fragments": 850, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001421785.1", "gtdb_species": "s__Sphingomonas sp001421785", "ani": 86.256, "matched_fragments": 681, "total_fragments": 850, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", 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