{
    "type": "genome",
    "identifier": "GCA_913778635.1",
    "organism": "uncultured Brevundimonas sp.",
    "title": "uncultured Brevundimonas sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_913778635.1",
        "bioproject": "PRJEB45634",
        "biosample": "SAMEA8944138",
        "wgs_master": "CAJYWY000000000.1",
        "refseq_category": "na",
        "taxid": "213418",
        "species_taxid": "213418",
        "organism_name": "uncultured Brevundimonas sp.",
        "infraspecific_name": "",
        "isolate": "SP60_2_metabat2_genome_mining.39",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/08/25",
        "asm_name": "SP60_2_metabat2_genome_mining.39",
        "submitter": "INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/913/778/635/GCA_913778635.1_SP60_2_metabat2_genome_mining.39",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-08-25",
    "dateModified": "2021-08-25",
    "datePublished": "2021-08-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Brevundimonas sp."
        ],
        "sample_taxid": [
            "213418"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.708 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 4.07,
        "strain_heterogeneity": 11.11,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2558277",
        "Number of Sequences": "422",
        "Longest Sequences (bp)": "41223",
        "N50 (bp)": "6952",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.5",
        "Number of CDSs": "2129",
        "Average Protein Length": "290.5",
        "Coding Ratio (%)": "72.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Brevundimonas huaxiensis",
                "strain": "strain=090558",
                "accession": "GCA_014218725.1",
                "taxid": 2725493,
                "species_taxid": 2725493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.1748,
                "matched_fragments": 544,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Brevundimonas vesicularis",
                "strain": "strain=NBRC 12165",
                "accession": "GCA_001592205.1",
                "taxid": 41276,
                "species_taxid": 41276,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 94.06,
                "matched_fragments": 537,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas mediterranea",
                "strain": "strain=DSM 14878",
                "accession": "GCA_014196125.1",
                "taxid": 74329,
                "species_taxid": 74329,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.4828,
                "matched_fragments": 495,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas aurantiaca",
                "strain": "strain=DSM 4731",
                "accession": "GCA_014199955.1",
                "taxid": 74316,
                "species_taxid": 74316,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.5231,
                "matched_fragments": 497,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas nasdae",
                "strain": "strain=JCM 11415",
                "accession": "GCA_016654005.1",
                "taxid": 172043,
                "species_taxid": 172043,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.0407,
                "matched_fragments": 484,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas albigilva",
                "strain": "strain=KEME 9005-016",
                "accession": "GCA_023503965.1",
                "taxid": 1312364,
                "species_taxid": 1312364,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.6037,
                "matched_fragments": 475,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas guildfordensis",
                "strain": "strain=Sa3CVA3",
                "accession": "GCA_014836405.1",
                "taxid": 2762241,
                "species_taxid": 2762241,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.8686,
                "matched_fragments": 403,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas vitisensis",
                "strain": "strain=GR-TSA-9",
                "accession": "GCA_016656965.1",
                "taxid": 2800818,
                "species_taxid": 2800818,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1802,
                "matched_fragments": 364,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas pishanensis",
                "strain": "strain=CHPC 1.3453",
                "accession": "GCA_022750635.1",
                "taxid": 2896315,
                "species_taxid": 2896315,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2634,
                "matched_fragments": 249,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caulobacter rhizosphaerae",
                "strain": "strain=CGMCC 1.15915",
                "accession": "GCA_014645055.1",
                "taxid": 2010972,
                "species_taxid": 2010972,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.524,
                "matched_fragments": 278,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phenylobacterium aquaticum",
                "strain": "strain=KACC 18306",
                "accession": "GCA_022695515.1",
                "taxid": 1763816,
                "species_taxid": 1763816,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9858,
                "matched_fragments": 234,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus pinisoli",
                "strain": "strain=XZZS9",
                "accession": "GCA_018413645.1",
                "taxid": 2835040,
                "species_taxid": 2835040,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5721,
                "matched_fragments": 85,
                "total_fragments": 640,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 4.07,
            "strain_heterogeneity": 11.11
        },
        "gtdb_result": [
            {
                "accession": "GCF_005484585.1",
                "gtdb_species": "s__Brevundimonas sp005484585",
                "ani": 95.346,
                "matched_fragments": 556,
                "total_fragments": 640,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.32",
                "min_intra_species_ani": "95.32",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000813765.1",
                "gtdb_species": "s__Brevundimonas nasdae_A",
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                "matched_fragments": 541,
                "total_fragments": 640,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.42",
                "min_intra_species_ani": "95.42",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001592205.1",
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                "ani": 94.06,
                "matched_fragments": 537,
                "total_fragments": 640,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.70",
                "min_intra_species_ani": "95.00",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCF_014204545.1",
                "gtdb_species": "s__Brevundimonas vesicularis_B",
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                "matched_fragments": 542,
                "total_fragments": 640,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000335735.1",
                "gtdb_species": "s__Brevundimonas sp000335735",
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                "matched_fragments": 526,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017086445.1",
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                "matched_fragments": 546,
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                "mean_intra_species_ani": "95.13",
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                "mean_intra_species_af": "0.83",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_002157625.1",
                "gtdb_species": "s__Brevundimonas sp002157625",
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                "matched_fragments": 518,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_016656965.1",
                "gtdb_species": "s__Brevundimonas sp016656965",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.348,
        "cell_length": 0.266,
        "doubling_h": null,
        "growth_tmp": 28.681,
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        "optimum_ph": 7.406,
        "genome_size": 3161332.56,
        "gc_content": 67.057,
        "coding_genes": 3106.166,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 49.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.1,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.9,
        "mesophilic_range_tmp": 1.0,
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        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Caulobacterales",
        "f__Caulobacteraceae",
        "g__Brevundimonas",
        "s__Brevundimonas sp005484585"
    ],
    "_genome_taxon": [
        "uncultured",
        "Brevundimonas",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Caulobacterales",
        "f__Caulobacteraceae",
        "g__Brevundimonas",
        "s__Brevundimonas sp005484585",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Caulobacterales",
        "Caulobacteraceae",
        "Brevundimonas",
        "Brevundimonas",
        "sp005484585"
    ],
    "_meo": [
        {
            "id": "MEO_0000419",
            "label": "plant body associated"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}