{ "type": "genome", "identifier": "GCA_916049585.1", "organism": "Neisseria flavescens", "title": "Neisseria flavescens", "description": "contaminated; derived from metagenome; fragmented assembly", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_916049585.1", "bioproject": "PRJEB41354", "biosample": "SAMEA9943319", "wgs_master": "CAJZIC000000000.1", "refseq_category": "na", "taxid": "484", "species_taxid": "484", "organism_name": "Neisseria flavescens", "infraspecific_name": "", "isolate": "ERR2764840_bin.7_metaWRAP_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/22", "asm_name": "ERR2764840_bin.7_metaWRAP_v1.1_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/049/585/GCA_916049585.1_ERR2764840_bin.7_metaWRAP_v1.1_MAG", "excluded_from_refseq": "contaminated; derived from metagenome; fragmented assembly", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-22", "dateModified": "2021-09-22", "datePublished": "2021-09-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Neisseria flavescens" ], "sample_taxid": [ "484" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany" ], "sample_host_location_id": [], "data_size": "0.323 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 50.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1133368", "Number of Sequences": "250", "Longest Sequences (bp)": "15840", "N50 (bp)": "4769", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "49.8", "Number of CDSs": "902", "Average Protein Length": "265.6", "Coding Ratio (%)": "63.4", "Number of rRNAs": "0", "Number of tRNAs": "13", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Neisseria perflava", "strain": "strain=CCUG 17915", "accession": "GCA_023472875.1", "taxid": 33053, "species_taxid": 33053, "relation_to_type": "suspected-type", "validated": true, "ani": 94.8149, "matched_fragments": 238, "total_fragments": 252, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria subflava", "strain": "strain=ATCC 49275", "accession": "GCA_005221305.1", "taxid": 28449, "species_taxid": 28449, "relation_to_type": "type", "validated": true, "ani": 93.9348, "matched_fragments": 235, "total_fragments": 252, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria flavescens", "strain": "strain=ATCC 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"relation_to_type": "type", "validated": true, "ani": 84.1103, "matched_fragments": 164, "total_fragments": 252, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria cinerea", "strain": "strain=FDAARGOS_871", "accession": "GCA_016028715.1", "taxid": 483, "species_taxid": 483, "relation_to_type": "type", "validated": true, "ani": 84.0788, "matched_fragments": 160, "total_fragments": 252, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria cinerea", "strain": "strain=NCTC10294", "accession": "GCA_900475315.1", "taxid": 483, "species_taxid": 483, "relation_to_type": "type", "validated": true, "ani": 83.9761, "matched_fragments": 163, "total_fragments": 252, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Morococcus cerebrosus", "strain": "strain=CIP 81.93", "accession": "GCA_000813705.1", "taxid": 1056807, "species_taxid": 1056807, "relation_to_type": "type", "validated": true, "ani": 83.5572, 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