{ "type": "genome", "identifier": "GCA_916438535.1", "organism": "uncultured Neisseria sp.", "title": "uncultured Neisseria sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Antimicrobial Resistance Research Center, National Institute of Infectious Diseases", "publication": [ {} ], "properties": { "assembly_accession": "GCA_916438535.1", "bioproject": "PRJDB9452", "biosample": "SAMEA10110234", "wgs_master": "CAKAEP000000000.1", "refseq_category": "na", "taxid": "237778", "species_taxid": "237778", "organism_name": "uncultured Neisseria sp.", "infraspecific_name": "", "isolate": "DRR214960_bin.35_metaWRAP_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/29", "asm_name": "DRR214960_bin.35_metaWRAP_v1.1_MAG", "submitter": "Antimicrobial Resistance Research Center, National Institute of Infectious Diseases", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/438/535/GCA_916438535.1_DRR214960_bin.35_metaWRAP_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-29", "dateModified": "2021-09-29", "datePublished": "2021-09-29", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Neisseria sp." ], "sample_taxid": [ "237778" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "0.654 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 45.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2353457", "Number of Sequences": "2", "Longest Sequences (bp)": "1245189", "N50 (bp)": "1245189", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "50.5", "Number of CDSs": "3424", "Average Protein Length": "161.5", "Coding Ratio (%)": "70.5", "Number of rRNAs": "9", "Number of tRNAs": "45", "Number of CRISPRs": "4" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Morococcus cerebrosus", "strain": "strain=CIP 81.93", "accession": "GCA_000813705.1", "taxid": 1056807, "species_taxid": 1056807, "relation_to_type": "type", "validated": true, "ani": 95.779, "matched_fragments": 559, "total_fragments": 784, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Morococcus cerebrosus", "strain": "strain=CIP 81.93", "accession": "GCA_022749515.1", "taxid": 1056807, "species_taxid": 1056807, "relation_to_type": "type", 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784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria meningitidis", "strain": "strain=PartJ-Nmeningitidis-RM8376", "accession": "GCA_022869645.1", "taxid": 487, "species_taxid": 487, "relation_to_type": "type", "validated": true, "ani": 85.3999, "matched_fragments": 379, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria elongata subsp. glycolytica", "strain": "strain=NCTC11050", "accession": "GCA_900475815.1", "taxid": 88719, "species_taxid": 495, "relation_to_type": "type", "validated": true, "ani": 84.5126, "matched_fragments": 305, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria elongata subsp. elongata", "strain": "strain=ATCC 25295", "accession": "GCA_900113545.1", "taxid": 214482, "species_taxid": 495, "relation_to_type": "type", "validated": true, "ani": 84.483, "matched_fragments": 301, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria elongata", "strain": "strain=NCTC10660", "accession": "GCA_900453895.1", "taxid": 495, "species_taxid": 495, "relation_to_type": "type", "validated": true, "ani": 84.4216, "matched_fragments": 304, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria flavescens", "strain": "strain=NCTC8263", "accession": "GCA_900453805.1", "taxid": 484, "species_taxid": 484, "relation_to_type": "type", "validated": true, "ani": 84.4021, "matched_fragments": 393, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria perflava", "strain": "strain=CCUG 17915", "accession": "GCA_023472875.1", "taxid": 33053, "species_taxid": 33053, "relation_to_type": "suspected-type", "validated": true, "ani": 83.2579, "matched_fragments": 408, "total_fragments": 784, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 45.83, 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