{
    "type": "genome",
    "identifier": "GCA_916438895.1",
    "organism": "Peptostreptococcus stomatis",
    "title": "Peptostreptococcus stomatis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Antimicrobial Resistance Research Center, National Institute of Infectious Diseases",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_916438895.1",
        "bioproject": "PRJDB9452",
        "biosample": "SAMEA10110172",
        "wgs_master": "CAKAGM000000000.1",
        "refseq_category": "na",
        "taxid": "341694",
        "species_taxid": "341694",
        "organism_name": "Peptostreptococcus stomatis",
        "infraspecific_name": "",
        "isolate": "DRR214960_bin.10_metaWRAP_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/29",
        "asm_name": "DRR214960_bin.10_metaWRAP_v1.1_MAG",
        "submitter": "Antimicrobial Resistance Research Center, National Institute of Infectious Diseases",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/438/895/GCA_916438895.1_DRR214960_bin.10_metaWRAP_v1.1_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-29",
    "dateModified": "2021-09-29",
    "datePublished": "2021-09-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Peptostreptococcus stomatis"
        ],
        "sample_taxid": [
            "341694"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.541 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1949781",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "1949781",
        "N50 (bp)": "1949781",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.2",
        "Number of CDSs": "2313",
        "Average Protein Length": "234.2",
        "Coding Ratio (%)": "83.3",
        "Number of rRNAs": "15",
        "Number of tRNAs": "60",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Peptostreptococcus stomatis",
                "strain": "strain=DSM 17678",
                "accession": "GCA_000147675.2",
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                "species_taxid": 341694,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.1537,
                "matched_fragments": 476,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus anaerobius",
                "strain": "strain=NCTC11460",
                "accession": "GCA_900454605.1",
                "taxid": 1261,
                "species_taxid": 1261,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.8543,
                "matched_fragments": 179,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus anaerobius",
                "strain": "strain=DSM 2949",
                "accession": "GCA_000381525.1",
                "taxid": 1261,
                "species_taxid": 1261,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.0799,
                "matched_fragments": 169,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus anaerobius",
                "strain": "strain=VPI 4330",
                "accession": "GCA_000318115.1",
                "taxid": 1261,
                "species_taxid": 1261,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5775,
                "matched_fragments": 152,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus porci",
                "strain": "strain=WCA-SAB-591-4A-A",
                "accession": "GCA_009695815.1",
                "taxid": 2652282,
                "species_taxid": 2652282,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9841,
                "matched_fragments": 93,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus russellii",
                "strain": "strain=RT-10B",
                "accession": "GCA_003012055.1",
                "taxid": 215200,
                "species_taxid": 215200,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9123,
                "matched_fragments": 110,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus canis",
                "strain": "strain=DSM 27025",
                "accession": "GCA_017874285.1",
                "taxid": 1159213,
                "species_taxid": 1159213,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.491,
                "matched_fragments": 87,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peptostreptococcus canis",
                "strain": "strain=DSM 27025",
                "accession": "GCA_014229965.1",
                "taxid": 1159213,
                "species_taxid": 1159213,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3178,
                "matched_fragments": 89,
                "total_fragments": 649,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.45,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900759325.1",
                "gtdb_species": "s__Peptostreptococcus sp900759325",
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                "matched_fragments": 504,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.17",
                "min_intra_species_ani": "97.99",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000147675.1",
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                "matched_fragments": 474,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.69",
                "min_intra_species_ani": "97.69",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000758885.1",
                "gtdb_species": "s__Peptostreptococcus sp000758885",
                "ani": 83.2443,
                "matched_fragments": 382,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000381525.1",
                "gtdb_species": "s__Peptostreptococcus anaerobius",
                "ani": 80.1072,
                "matched_fragments": 170,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "98.74",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCF_900112955.1",
                "gtdb_species": "s__Peptostreptococcus sp900112955",
                "ani": 79.1516,
                "matched_fragments": 86,
                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900110295.1",
                "gtdb_species": "s__Peptostreptococcus russellii_A",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
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                "mean_intra_species_ani": "98.51",
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                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003012055.1",
                "gtdb_species": "s__Peptostreptococcus russellii",
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                "total_fragments": 649,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
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                "mean_intra_species_ani": "98.54",
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                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_014229965.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
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                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.097,
        "cell_length": -0.097,
        "doubling_h": null,
        "growth_tmp": 37.0,
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        "genome_size": 1988044.0,
        "gc_content": 36.66,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 1.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Peptostreptococcaceae",
        "g__Peptostreptococcus",
        "s__Peptostreptococcus sp900759325"
    ],
    "_genome_taxon": [
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        "stomatis",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Peptostreptococcaceae",
        "g__Peptostreptococcus",
        "s__Peptostreptococcus sp900759325",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Peptostreptococcales",
        "Peptostreptococcaceae",
        "Peptostreptococcus",
        "Peptostreptococcus",
        "sp900759325"
    ],
    "_meo": [
        {
            "id": "MEO_0000617",
            "label": "saliva"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}