<?xml version="1.0" ?>
<BioSampleSet><BioSample access="public" publication_date="2022-01-21T00:00:00.000" last_update="2022-01-24T04:41:34.000" submission_date="2022-01-22T08:17:03.533" id="25180123" accession="SAMEA12514463">   <Ids>     <Id db="BioSample" is_primary="1">SAMEA12514463</Id>     <Id db="SRA">ERS10121065</Id>   </Ids>   <Description>     <Title>Metagenome-assembled genome: ERR3827227_bin.6_metaWRAP_v1.1_MAG</Title>     <Organism taxonomy_id="55565" taxonomy_name="Actinomyces graevenitzii">       <OrganismName>Actinomyces graevenitzii</OrganismName>     </Organism>     <Comment>       <Paragraph>This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR3827227 of study ERP119456.</Paragraph>     </Comment>   </Description>   <Owner>     <Name>EBI</Name>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="ENA first public">2022-01-21</Attribute>     <Attribute attribute_name="ENA last update">2022-01-21</Attribute>     <Attribute attribute_name="ENA-CHECKLIST">ERC000047</Attribute>     <Attribute attribute_name="External Id">SAMEA12514463</Attribute>     <Attribute attribute_name="INSDC center alias">EMG</Attribute>     <Attribute attribute_name="INSDC center name">EMG</Attribute>     <Attribute attribute_name="INSDC first public">2022-01-21T20:47:30Z</Attribute>     <Attribute attribute_name="INSDC last update">2022-01-21T20:47:30Z</Attribute>     <Attribute attribute_name="INSDC status">public</Attribute>     <Attribute attribute_name="Submitter Id">ERR3827227_bin.6_metaWRAP_v1.1_MAG</Attribute>     <Attribute attribute_name="assembly quality">Many fragments with little to no review of assembly other than reporting of standard assembly statistics</Attribute>     <Attribute attribute_name="assembly software">megahit v1.2.9</Attribute>     <Attribute attribute_name="binning parameters">MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.</Attribute>     <Attribute attribute_name="binning software">metaWRAP v1.1</Attribute>     <Attribute attribute_name="broker name">EMG broker account, EMBL-EBI</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">not provided</Attribute>     <Attribute attribute_name="completeness score">98.58</Attribute>     <Attribute attribute_name="completeness software">CheckM</Attribute>     <Attribute attribute_name="contamination score">1.16</Attribute>     <Attribute attribute_name="environment (biome)" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">Human oral metagenome</Attribute>     <Attribute attribute_name="environment (feature)" harmonized_name="env_local_scale" display_name="local-scale environmental context">Human oral cavity</Attribute>     <Attribute attribute_name="environment (material)" harmonized_name="env_medium" display_name="environmental medium">Human oral cavity</Attribute>     <Attribute attribute_name="geographic location (country and/or sea)" harmonized_name="geo_loc_name" display_name="geographic location">not provided</Attribute>     <Attribute attribute_name="geographic location (latitude)">not provided</Attribute>     <Attribute attribute_name="geographic location (longitude)">not provided</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">metagenome-assembled genome</Attribute>     <Attribute attribute_name="isolation source" harmonized_name="isolation_source" display_name="isolation source">human oral metagenome</Attribute>     <Attribute attribute_name="metagenomic source">human oral metagenome</Attribute>     <Attribute attribute_name="project name" harmonized_name="project_name" display_name="project name">The microbiome of the oral cavity is the second largest and diverse microbiota after the gut, harboring over 700 species of bacteria and including also fungi, viruses and protozoa. A detailed site-specific map of oral microorganisms (including also eukaryotes and viruses) and their relative abundance is still missing. The data of this study provide for the first time a comprehensive view of the healthy oral microbiome and its resistome, contributing to a deeper understanding of the composition of oral microbiome in the healthy subject, and providing an important reference for future studies exploring functional and metabolic alterations associated with diseases, which might be useful in identifying microbial signatures for targeted therapies and precision medicine.</Attribute>     <Attribute attribute_name="sample derived from">SAMEA6489092</Attribute>     <Attribute attribute_name="sample name" harmonized_name="sample_name" display_name="sample name">ERR3827227_bin.6_metaWRAP_v1.1_MAG</Attribute>     <Attribute attribute_name="sequencing method">Ion Torrent S5</Attribute>     <Attribute attribute_name="taxonomic identity marker">multi-marker approach</Attribute>   </Attributes>   <Status status="live" when="2022-01-23T08:36:16.550"/> </BioSample> </BioSampleSet>
