{
    "type": "genome",
    "identifier": "GCA_934162485.1",
    "organism": "uncultured Bacilli bacterium",
    "title": "uncultured Bacilli bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934162485.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13522775",
        "wgs_master": "CAKPIY000000000.1",
        "refseq_category": "na",
        "taxid": "224209",
        "species_taxid": "224209",
        "organism_name": "uncultured Bacilli bacterium",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_15_RAU0016YZ.225",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/15",
        "asm_name": "ERR7738493_bin.225",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/162/485/GCA_934162485.1_ERR7738493_bin.225",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-15",
    "dateModified": "2022-04-15",
    "datePublished": "2022-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Bacilli bacterium"
        ],
        "sample_taxid": [
            "224209"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Nepal"
        ],
        "sample_host_location_id": [],
        "data_size": "0.491 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1832365",
        "Number of Sequences": "34",
        "Longest Sequences (bp)": "204569",
        "N50 (bp)": "93420",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "24.9",
        "Number of CDSs": "1618",
        "Average Protein Length": "340.7",
        "Coding Ratio (%)": "90.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Clostridium tarantellae",
                "strain": "strain=DSM 3997",
                "accession": "GCA_009295725.1",
                "taxid": 39493,
                "species_taxid": 39493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6706,
                "matched_fragments": 84,
                "total_fragments": 594,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium cagae",
                "strain": "strain=Marseille-P4344",
                "accession": "GCA_900290265.1",
                "taxid": 2080751,
                "species_taxid": 2080751,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.5744,
                "matched_fragments": 68,
                "total_fragments": 594,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900551385.1",
                "gtdb_species": "s__CAG-449 sp900551385",
                "ani": 96.2435,
                "matched_fragments": 322,
                "total_fragments": 594,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RFN20;f__CAG-449;g__CAG-449",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.57",
                "min_intra_species_ani": "95.00",
                "mean_intra_species_af": "0.71",
                "min_intra_species_af": "0.63",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905204225.1",
                "gtdb_species": "s__CAG-449 sp905204225",
                "ani": 94.9478,
                "matched_fragments": 423,
                "total_fragments": 594,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RFN20;f__CAG-449;g__CAG-449",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000432895.1",
                "gtdb_species": "s__CAG-449 sp000432895",
                "ani": 81.0168,
                "matched_fragments": 257,
                "total_fragments": 594,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RFN20;f__CAG-449;g__CAG-449",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.56",
                "min_intra_species_ani": "98.56",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_015059095.1",
                "gtdb_species": "s__UBA3210 sp015059095",
                "ani": 76.8692,
                "matched_fragments": 100,
                "total_fragments": 594,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RFN20;f__CAG-449;g__UBA3210",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015059045.1",
                "gtdb_species": "s__UBA3210 sp015059045",
                "ani": 76.7203,
                "matched_fragments": 89,
                "total_fragments": 594,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RFN20;f__CAG-449;g__UBA3210",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__RFN20",
        "f__CAG-449",
        "g__CAG-449",
        "s__CAG-449 sp900551385"
    ],
    "_genome_taxon": [
        "uncultured",
        "Bacilli",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__RFN20",
        "f__CAG-449",
        "g__CAG-449",
        "s__CAG-449 sp900551385",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "RFN20",
        "CAG-449",
        "CAG-449",
        "CAG-449",
        "sp900551385"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}