{
    "type": "genome",
    "identifier": "GCA_934190835.1",
    "organism": "uncultured Turicibacter sp.",
    "title": "uncultured Turicibacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934190835.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13481720",
        "wgs_master": "CAKPTM000000000.1",
        "refseq_category": "na",
        "taxid": "297316",
        "species_taxid": "297316",
        "organism_name": "uncultured Turicibacter sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_B_15_1593.295",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/15",
        "asm_name": "ERR7745743_bin.295",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/190/835/GCA_934190835.1_ERR7745743_bin.295",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-15",
    "dateModified": "2022-04-15",
    "datePublished": "2022-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Turicibacter sp."
        ],
        "sample_taxid": [
            "297316"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.603 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 78.79,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2098425",
        "Number of Sequences": "386",
        "Longest Sequences (bp)": "43757",
        "N50 (bp)": "7653",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.4",
        "Number of CDSs": "1750",
        "Average Protein Length": "272.6",
        "Coding Ratio (%)": "68.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "9",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Turicibacter bilis",
                "strain": "strain=MMM721",
                "accession": "GCA_024499055.1",
                "taxid": 2735723,
                "species_taxid": 2735723,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.7684,
                "matched_fragments": 472,
                "total_fragments": 492,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Turicibacter bilis",
                "strain": "strain=MMM721",
                "accession": "GCA_018305205.1",
                "taxid": 2735723,
                "species_taxid": 2735723,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.685,
                "matched_fragments": 475,
                "total_fragments": 492,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Turicibacter sanguinis",
                "strain": "strain=MOL361",
                "accession": "GCA_013046825.1",
                "taxid": 154288,
                "species_taxid": 154288,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6551,
                "matched_fragments": 275,
                "total_fragments": 492,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 78.79,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001543345.1",
                "gtdb_species": "s__Turicibacter sp001543345",
                "ani": 98.551,
                "matched_fragments": 467,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.30",
                "min_intra_species_ani": "97.82",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 10,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017888305.1",
                "gtdb_species": "s__Turicibacter sp017888305",
                "ani": 82.9073,
                "matched_fragments": 278,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013046825.1",
                "gtdb_species": "s__Turicibacter sanguinis",
                "ani": 80.6551,
                "matched_fragments": 275,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.52",
                "min_intra_species_ani": "99.21",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 18,
                "status": "-"
            },
            {
                "accession": "GCA_002493395.1",
                "gtdb_species": "s__Turicibacter sp002493395",
                "ani": 80.3072,
                "matched_fragments": 208,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009935875.1",
                "gtdb_species": "s__Turicibacter sp002311155",
                "ani": 80.0067,
                "matched_fragments": 216,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.25",
                "min_intra_species_ani": "99.25",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003486705.1",
                "gtdb_species": "s__Turicibacter sp003486705",
                "ani": 78.4272,
                "matched_fragments": 113,
                "total_fragments": 492,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Haloplasmatales_A;f__Turicibacteraceae;g__Turicibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": 7.5,
        "genome_size": 2953411.0,
        "gc_content": 34.1,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__MOL361",
        "f__Turicibacteraceae",
        "g__Turicibacter",
        "s__Turicibacter bilis"
    ],
    "_genome_taxon": [
        "uncultured",
        "Turicibacter",
        "sp.",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__MOL361",
        "f__Turicibacteraceae",
        "g__Turicibacter",
        "s__Turicibacter bilis",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "MOL361",
        "Turicibacteraceae",
        "Turicibacter",
        "Turicibacter",
        "bilis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}