{
    "type": "genome",
    "identifier": "GCA_934190865.1",
    "organism": "uncultured Rummeliibacillus sp.",
    "title": "uncultured Rummeliibacillus sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934190865.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13473494",
        "wgs_master": "CAKPTV000000000.1",
        "refseq_category": "na",
        "taxid": "762292",
        "species_taxid": "762292",
        "organism_name": "uncultured Rummeliibacillus sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_P_21_2150.310",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7738643_bin.310",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/190/865/GCA_934190865.1_ERR7738643_bin.310",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Rummeliibacillus sp."
        ],
        "sample_taxid": [
            "762292"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "1.378 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4722045",
        "Number of Sequences": "1321",
        "Longest Sequences (bp)": "38067",
        "N50 (bp)": "4042",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.0",
        "Number of CDSs": "3562",
        "Average Protein Length": "259.9",
        "Coding Ratio (%)": "58.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "37",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Rummeliibacillus suwonensis",
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                "accession": "GCA_007896435.1",
                "taxid": 1306154,
                "species_taxid": 1306154,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.7846,
                "matched_fragments": 450,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Rummeliibacillus pycnus",
                "strain": "strain=DSM 15030",
                "accession": "GCA_002884495.1",
                "taxid": 101070,
                "species_taxid": 101070,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 256,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rummeliibacillus stabekisii",
                "strain": "strain=NBRC 104870",
                "accession": "GCA_007988965.1",
                "taxid": 241244,
                "species_taxid": 241244,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3009,
                "matched_fragments": 114,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rummeliibacillus stabekisii",
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                "accession": "GCA_014202625.1",
                "taxid": 241244,
                "species_taxid": 241244,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2767,
                "matched_fragments": 115,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kurthia gibsonii",
                "strain": "strain=NBRC 15534",
                "accession": "GCA_006539985.1",
                "taxid": 33946,
                "species_taxid": 33946,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6795,
                "matched_fragments": 70,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Viridibacillus soli",
                "strain": "strain=YIM B01967",
                "accession": "GCA_016612995.1",
                "taxid": 2798301,
                "species_taxid": 2798301,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4055,
                "matched_fragments": 125,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Viridibacillus arvi",
                "strain": "strain=DSM 16317",
                "accession": "GCA_001274945.1",
                "taxid": 263475,
                "species_taxid": 263475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2806,
                "matched_fragments": 114,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kurthia senegalensis",
                "strain": "strain=type strain: JC8E",
                "accession": "GCA_000285595.1",
                "taxid": 1033740,
                "species_taxid": 1033740,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1946,
                "matched_fragments": 70,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ureibacillus chungkukjangi",
                "strain": "strain=2RL32",
                "accession": "GCA_003049615.1",
                "taxid": 1202712,
                "species_taxid": 1202712,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8804,
                "matched_fragments": 50,
                "total_fragments": 806,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_007896435.1",
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                "matched_fragments": 450,
                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Rummeliibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.15",
                "min_intra_species_ani": "97.53",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_003576525.1",
                "gtdb_species": "s__Rummeliibacillus sp003576525",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Rummeliibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.66",
                "min_intra_species_ani": "98.66",
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                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002884495.1",
                "gtdb_species": "s__Rummeliibacillus pycnus",
                "ani": 81.4038,
                "matched_fragments": 255,
                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Rummeliibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007988965.1",
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                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Rummeliibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.11",
                "min_intra_species_ani": "96.96",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_006539985.1",
                "gtdb_species": "s__Kurthia gibsonii",
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                "matched_fragments": 70,
                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Kurthia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.46",
                "min_intra_species_ani": "97.18",
                "mean_intra_species_af": "0.93",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_002813185.1",
                "gtdb_species": "s__Viridibacillus sp002813185",
                "ani": 78.3211,
                "matched_fragments": 117,
                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Viridibacillus",
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                "min_intra_species_ani": "98.00",
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                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_001955655.1",
                "gtdb_species": "s__Viridibacillus arenosi",
                "ani": 78.272,
                "matched_fragments": 113,
                "total_fragments": 806,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Viridibacillus",
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                "min_intra_species_ani": "99.53",
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                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 4,
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            },
            {
                "accession": "GCF_001274945.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Viridibacillus",
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            },
            {
                "accession": "GCF_000285595.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Kurthia",
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                "mean_intra_species_ani": "100.00",
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                "mean_intra_species_af": "1.00",
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            },
            {
                "accession": "GCF_003991225.1",
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                "num_clustered_genomes": 8,
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            },
            {
                "accession": "GCF_005491425.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_003217295.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Ureibacillus",
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                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.021,
        "cell_length": 0.475,
        "doubling_h": null,
        "growth_tmp": 30.0,
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        "genome_size": 3420739.333,
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        "coding_genes": 3257.5,
        "rRNA16S_genes": 12.0,
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        "sporulation": 1.0,
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        "range_salinity": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": 1.0,
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        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    },
    "_gtdb_taxon": [
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        "p__Bacillota",
        "c__Bacilli",
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        "f__Planococcaceae",
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        "s__Rummeliibacillus suwonensis"
    ],
    "_genome_taxon": [
        "uncultured",
        "Rummeliibacillus",
        "sp.",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Bacillales_A",
        "f__Planococcaceae",
        "g__Rummeliibacillus",
        "s__Rummeliibacillus suwonensis",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "Bacillales",
        "A",
        "Planococcaceae",
        "Rummeliibacillus",
        "Rummeliibacillus",
        "suwonensis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}