{ "type": "genome", "identifier": "GCA_934191735.1", "organism": "uncultured Prevotella sp.", "title": "uncultured Prevotella sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "stanford university school of medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934191735.1", "bioproject": "PRJEB49206", "biosample": "SAMEA13498160", "wgs_master": "CAKPUM000000000.1", "refseq_category": "na", "taxid": "159272", "species_taxid": "159272", "organism_name": "uncultured Prevotella sp.", "infraspecific_name": "", "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_P_24_2355.174", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/16", "asm_name": "ERR7737966_bin.174", "submitter": "stanford university school of medicine", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/191/735/GCA_934191735.1_ERR7737966_bin.174", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-16", "dateModified": "2022-04-16", "datePublished": "2022-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Prevotella sp." ], "sample_taxid": [ "159272" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tanzania" ], "sample_host_location_id": [], "data_size": "1.006 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3489925", "Number of Sequences": "90", "Longest Sequences (bp)": "196167", "N50 (bp)": "57267", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "45.5", "Number of CDSs": "2567", "Average Protein Length": "383.7", "Coding Ratio (%)": "84.7", "Number of rRNAs": "0", "Number of tRNAs": "50", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Prevotella pectinovora", "strain": "strain=P4-76", "accession": "GCA_000834015.1", "taxid": 1602169, "species_taxid": 1602169, "relation_to_type": "type", "validated": true, "ani": 80.4022, "matched_fragments": 447, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella hominis", "strain": "strain=BCRC 81118", "accession": "GCA_004535825.1", "taxid": 2518605, "species_taxid": 2518605, "relation_to_type": "type", "validated": true, "ani": 79.0314, "matched_fragments": 144, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella stercorea", "strain": "strain=DSM 18206", "accession": "GCA_000235885.1", "taxid": 363265, "species_taxid": 363265, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6458, "matched_fragments": 170, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella copri", "strain": "strain=DSM 18205", "accession": "GCA_025151535.1", "taxid": 165179, "species_taxid": 165179, "relation_to_type": "suspected-type", "validated": true, "ani": 78.3318, "matched_fragments": 137, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hallella faecis", "strain": "strain=CLA-AA-H145", "accession": "GCA_018789675.1", "taxid": 2841596, "species_taxid": 2841596, "relation_to_type": "type", "validated": true, "ani": 78.0706, "matched_fragments": 100, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella fusca", "strain": "strain=W1435", "accession": "GCA_018128145.1", "taxid": 589436, "species_taxid": 589436, "relation_to_type": "type", "validated": true, "ani": 77.8972, "matched_fragments": 73, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella fusca", "strain": "strain=W1435", "accession": "GCA_001262015.1", "taxid": 589436, "species_taxid": 589436, "relation_to_type": "type", "validated": true, "ani": 77.8951, "matched_fragments": 71, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella oris", "strain": "strain=DSM 18711", "accession": "GCA_000377685.1", "taxid": 28135, "species_taxid": 28135, "relation_to_type": "type", "validated": true, "ani": 77.5333, "matched_fragments": 71, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella oris", "strain": "strain=NCTC13071", "accession": "GCA_900637655.1", "taxid": 28135, "species_taxid": 28135, "relation_to_type": "type", "validated": true, "ani": 77.4741, "matched_fragments": 71, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella lascolaii", "strain": "strain=khD1", "accession": "GCA_900079775.1", "taxid": 1776379, "species_taxid": 1776379, "relation_to_type": "type", "validated": true, "ani": 77.1983, "matched_fragments": 110, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylanibacter muris", "strain": "strain=PMUR", "accession": "GCA_013166605.1", "taxid": 2736290, "species_taxid": 2736290, "relation_to_type": "type", "validated": true, "ani": 77.0814, "matched_fragments": 80, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella multiformis", "strain": "strain=DSM 16608", "accession": "GCA_000191065.1", "taxid": 282402, "species_taxid": 282402, "relation_to_type": "type", "validated": true, "ani": 77.0352, "matched_fragments": 74, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylanibacter rodentium", "strain": "strain=PROD", "accession": "GCA_013166575.1", "taxid": 2736289, "species_taxid": 2736289, "relation_to_type": "type", "validated": true, "ani": 76.8745, "matched_fragments": 104, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella bryantii", "strain": "strain=B14", "accession": "GCA_022024235.1", "taxid": 77095, "species_taxid": 77095, "relation_to_type": "type", "validated": true, "ani": 76.8417, "matched_fragments": 53, "total_fragments": 1120, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella dentasini", "strain": "strain=JCM 15908", "accession": "GCA_000614065.1", "taxid": 589537, "species_taxid": 589537, "relation_to_type": "type", "validated": true, 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