{ "type": "genome", "identifier": "GCA_934203155.1", "organism": "uncultured Prevotella sp.", "title": "uncultured Prevotella sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "stanford university school of medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934203155.1", "bioproject": "PRJEB49206", "biosample": "SAMEA13481722", "wgs_master": "CAKPYS000000000.1", "refseq_category": "na", "taxid": "159272", "species_taxid": "159272", "organism_name": "uncultured Prevotella sp.", "infraspecific_name": "", "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_I_4_2616.219", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/16", "asm_name": "ERR7746111_bin.219", "submitter": "stanford university school of medicine", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/203/155/GCA_934203155.1_ERR7746111_bin.219", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-16", "dateModified": "2022-04-16", "datePublished": "2022-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Prevotella sp." ], "sample_taxid": [ "159272" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tanzania" ], "sample_host_location_id": [], "data_size": "0.760 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, 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"matched_fragments": 189, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hallella seregens", "strain": "strain=ATCC 51272", "accession": "GCA_000518545.1", "taxid": 52229, "species_taxid": 52229, "relation_to_type": "type", "validated": true, "ani": 77.2035, "matched_fragments": 163, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella albensis", "strain": "strain=JCM 12258", "accession": "GCA_000613525.1", "taxid": 77768, "species_taxid": 77768, "relation_to_type": "type", "validated": true, "ani": 77.1001, "matched_fragments": 52, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella buccae", "strain": "strain=ATCC 33574", "accession": "GCA_000184945.1", "taxid": 28126, "species_taxid": 28126, "relation_to_type": "type", "validated": true, "ani": 77.0918, "matched_fragments": 138, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hallella faecis", "strain": "strain=CLA-AA-H145", "accession": "GCA_018789675.1", "taxid": 2841596, "species_taxid": 2841596, "relation_to_type": "type", "validated": true, "ani": 77.0807, "matched_fragments": 169, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella dentalis", "strain": "strain=DSM 3688", "accession": "GCA_000242335.3", "taxid": 52227, "species_taxid": 52227, "relation_to_type": "type", "validated": true, "ani": 77.0804, "matched_fragments": 171, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella albensis", "strain": "strain=DSM 11370", "accession": "GCA_000426565.1", "taxid": 77768, "species_taxid": 77768, "relation_to_type": "type", "validated": true, "ani": 77.0504, "matched_fragments": 53, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella dentalis", "strain": "strain=DSM 3688", "accession": "GCA_000220215.1", "taxid": 52227, "species_taxid": 52227, "relation_to_type": "type", "validated": true, "ani": 77.0321, "matched_fragments": 174, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella illustrans", "strain": "strain=A2931", "accession": "GCA_017426725.1", "taxid": 2800387, "species_taxid": 2800387, "relation_to_type": "type", "validated": true, "ani": 76.9716, "matched_fragments": 93, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella fusca", "strain": "strain=JCM 17724", "accession": "GCA_000614245.1", "taxid": 589436, "species_taxid": 589436, "relation_to_type": "type", "validated": true, "ani": 76.9116, "matched_fragments": 75, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella fusca", "strain": "strain=W1435", "accession": "GCA_001262015.1", "taxid": 589436, "species_taxid": 589436, "relation_to_type": "type", "validated": true, "ani": 76.8769, "matched_fragments": 77, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella fusca", "strain": "strain=W1435", "accession": "GCA_018128145.1", "taxid": 589436, "species_taxid": 589436, "relation_to_type": "type", "validated": true, "ani": 76.8125, "matched_fragments": 78, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella lascolaii", "strain": "strain=khD1", "accession": "GCA_900079775.1", "taxid": 1776379, "species_taxid": 1776379, "relation_to_type": "type", "validated": true, "ani": 76.6583, "matched_fragments": 108, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella enoeca", "strain": "strain=JCM 12259", "accession": "GCA_000613405.1", "taxid": 76123, "species_taxid": 76123, "relation_to_type": "type", "validated": true, "ani": 76.5769, "matched_fragments": 53, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylanibacter rodentium", "strain": "strain=PROD", "accession": "GCA_013166575.1", "taxid": 2736289, "species_taxid": 2736289, "relation_to_type": "type", "validated": true, "ani": 76.5241, "matched_fragments": 92, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella maculosa", "strain": "strain=JCM 15638", "accession": "GCA_000613965.1", "taxid": 439703, "species_taxid": 439703, "relation_to_type": "type", "validated": true, "ani": 76.4637, "matched_fragments": 70, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella maculosa", "strain": "strain=DSM 19339", "accession": "GCA_000382385.1", "taxid": 439703, "species_taxid": 439703, "relation_to_type": "type", "validated": true, "ani": 76.4355, "matched_fragments": 71, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella shahii", "strain": "strain=DSM 15611", "accession": "GCA_003201715.1", "taxid": 228603, "species_taxid": 228603, "relation_to_type": "type", "validated": true, "ani": 76.4225, "matched_fragments": 53, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002251385.1", "gtdb_species": "s__Prevotella sp002251385", "ani": 97.1588, "matched_fragments": 778, "total_fragments": 860, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.22", "min_intra_species_ani": "97.07", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 8, "status": "conclusive" }, { "accession": "GCA_004554665.1", "gtdb_species": 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