{
    "type": "genome",
    "identifier": "GCA_934229875.1",
    "organism": "uncultured Prevotella sp.",
    "title": "uncultured Prevotella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934229875.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13476358",
        "wgs_master": "CAKQEH000000000.1",
        "refseq_category": "na",
        "taxid": "159272",
        "species_taxid": "159272",
        "organism_name": "uncultured Prevotella sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_J_10_2310.5",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7738156_bin.5",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/229/875/GCA_934229875.1_ERR7738156_bin.5",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotella sp."
        ],
        "sample_taxid": [
            "159272"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.919 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 62.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3186464",
        "Number of Sequences": "191",
        "Longest Sequences (bp)": "108332",
        "N50 (bp)": "27281",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.0",
        "Number of CDSs": "2320",
        "Average Protein Length": "373.7",
        "Coding Ratio (%)": "81.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "28",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_009495405.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.3021,
                "matched_fragments": 559,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_000157935.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.1825,
                "matched_fragments": 583,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
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                "accession": "GCA_025151535.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.1355,
                "matched_fragments": 590,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella hominis",
                "strain": "strain=BCRC 81118",
                "accession": "GCA_004535825.1",
                "taxid": 2518605,
                "species_taxid": 2518605,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.1706,
                "matched_fragments": 475,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella stercorea",
                "strain": "strain=DSM 18206",
                "accession": "GCA_000235885.1",
                "taxid": 363265,
                "species_taxid": 363265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.9374,
                "matched_fragments": 111,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella bryantii",
                "strain": "strain=B14",
                "accession": "GCA_022024235.1",
                "taxid": 77095,
                "species_taxid": 77095,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1204,
                "matched_fragments": 88,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella albensis",
                "strain": "strain=JCM 12258",
                "accession": "GCA_000613525.1",
                "taxid": 77768,
                "species_taxid": 77768,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9216,
                "matched_fragments": 110,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella multiformis",
                "strain": "strain=DSM 16608",
                "accession": "GCA_000191065.1",
                "taxid": 282402,
                "species_taxid": 282402,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5135,
                "matched_fragments": 68,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella denticola",
                "strain": "strain=NCTC13067",
                "accession": "GCA_900454835.1",
                "taxid": 28129,
                "species_taxid": 28129,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4315,
                "matched_fragments": 71,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella illustrans",
                "strain": "strain=A2931",
                "accession": "GCA_017426725.1",
                "taxid": 2800387,
                "species_taxid": 2800387,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4185,
                "matched_fragments": 64,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella denticola",
                "strain": "strain=DSM 20614",
                "accession": "GCA_000421205.1",
                "taxid": 28129,
                "species_taxid": 28129,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4174,
                "matched_fragments": 69,
                "total_fragments": 972,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 62.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900556795.1",
                "gtdb_species": "s__Prevotella sp900556795",
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                "matched_fragments": 388,
                "total_fragments": 972,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.39",
                "min_intra_species_ani": "96.16",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_009494395.1",
                "gtdb_species": "s__Prevotella sp900546535",
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                "matched_fragments": 745,
                "total_fragments": 972,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.78",
                "min_intra_species_ani": "96.11",
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                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_900770515.1",
                "gtdb_species": "s__Prevotella sp900770515",
                "ani": 92.4407,
                "matched_fragments": 362,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002224675.1",
                "gtdb_species": "s__Prevotella copri_A",
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                "matched_fragments": 634,
                "total_fragments": 972,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "96.28",
                "min_intra_species_ani": "96.07",
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                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCA_900544825.1",
                "gtdb_species": "s__Prevotella sp900544825",
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                "matched_fragments": 569,
                "total_fragments": 972,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "98.76",
                "mean_intra_species_af": "0.90",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "accession": "GCA_900551985.1",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_900765465.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
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        ]
    },
    "_bac2feature": {
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    "_gtdb_taxon": [
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        "s__Prevotella sp900556795"
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    "_genome_taxon": [
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        "sp.",
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        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp900556795",
        "Bacteria",
        "Bacteroidota",
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        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
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    "_meo": [
        {
            "id": "MEO_0000054",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}