{
    "type": "genome",
    "identifier": "GCA_934307195.1",
    "organism": "uncultured Roseburia sp.",
    "title": "uncultured Roseburia sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934307195.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13485083",
        "wgs_master": "CAKRCH000000000.1",
        "refseq_category": "na",
        "taxid": "512314",
        "species_taxid": "512314",
        "organism_name": "uncultured Roseburia sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_J_1_RAJ1015YZ.306",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7745346_bin.306",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/307/195/GCA_934307195.1_ERR7745346_bin.306",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Roseburia sp."
        ],
        "sample_taxid": [
            "512314"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Nepal"
        ],
        "sample_host_location_id": [],
        "data_size": "0.993 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3507815",
        "Number of Sequences": "39",
        "Longest Sequences (bp)": "555438",
        "N50 (bp)": "133521",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.5",
        "Number of CDSs": "3199",
        "Average Protein Length": "326.2",
        "Coding Ratio (%)": "89.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Roseburia intestinalis",
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                "accession": "GCA_000156535.1",
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                "species_taxid": 166486,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 891,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Roseburia intestinalis",
                "strain": "strain=L1 82",
                "accession": "GCA_025151715.1",
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                "status": "below_threshold"
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia inulinivorans",
                "strain": "strain=DSM 16841",
                "accession": "GCA_000174195.1",
                "taxid": 360807,
                "species_taxid": 360807,
                "relation_to_type": "suspected-type",
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                "total_fragments": 1153,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia hominis",
                "strain": "strain=A2-183",
                "accession": "GCA_000225345.1",
                "taxid": 301301,
                "species_taxid": 301301,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8286,
                "matched_fragments": 299,
                "total_fragments": 1153,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia hansenii",
                "strain": "strain=DSM 20583",
                "accession": "GCA_025147655.1",
                "taxid": 1322,
                "species_taxid": 1322,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4007,
                "matched_fragments": 60,
                "total_fragments": 1153,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia faecis",
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                "accession": "GCA_001406815.1",
                "taxid": 301302,
                "species_taxid": 301302,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1177,
                "matched_fragments": 192,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia porci",
                "strain": "strain=MUC/MUC-530-WT-4D",
                "accession": "GCA_009695765.1",
                "taxid": 2605790,
                "species_taxid": 2605790,
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                "matched_fragments": 198,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Ruminococcus] lactaris",
                "strain": "strain=ATCC 29176",
                "accession": "GCA_025152405.1",
                "taxid": 46228,
                "species_taxid": 46228,
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                "validated": true,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia lenta",
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                "taxid": 2763061,
                "species_taxid": 2763061,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Jingyaoa shaoxingensis",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eubacterium ramulus",
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                "accession": "GCA_000469345.1",
                "taxid": 39490,
                "species_taxid": 39490,
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            {
                "organism_name": "[Ruminococcus] gnavus",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalimonas umbilicata",
                "strain": "strain=EGH7",
                "accession": "GCA_003402615.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalimonas umbilicata",
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                "matched_fragments": 59,
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            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCF_003470905.1",
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        ]
    },
    "_bac2feature": {
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    ],
    "_genome_taxon": [
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        "sp.",
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
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        "Bacillota",
        "A",
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        "Lachnospirales",
        "Lachnospiraceae",
        "Roseburia",
        "Roseburia",
        "rectibacter"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}