{
    "type": "genome",
    "identifier": "GCA_934359705.1",
    "organism": "uncultured Lachnospiraceae bacterium",
    "title": "uncultured Lachnospiraceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934359705.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13490405",
        "wgs_master": "CAKRLR000000000.1",
        "refseq_category": "na",
        "taxid": "297314",
        "species_taxid": "297314",
        "organism_name": "uncultured Lachnospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_K_14_2624.375",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7745990_bin.375",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/359/705/GCA_934359705.1_ERR7745990_bin.375",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Lachnospiraceae bacterium"
        ],
        "sample_taxid": [
            "297314"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.866 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3023422",
        "Number of Sequences": "114",
        "Longest Sequences (bp)": "128638",
        "N50 (bp)": "45563",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.1",
        "Number of CDSs": "2598",
        "Average Protein Length": "340.4",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Wujia chipingensis",
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                "accession": "GCA_014337155.1",
                "taxid": 2763670,
                "species_taxid": 2763670,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 105,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia inulinivorans",
                "strain": "strain=DSM 16841",
                "accession": "GCA_000174195.1",
                "taxid": 360807,
                "species_taxid": 360807,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "matched_fragments": 54,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Jutongia hominis",
                "strain": "strain=BX3",
                "accession": "GCA_014384965.1",
                "taxid": 2763664,
                "species_taxid": 2763664,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.485,
                "matched_fragments": 52,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerobutyricum hallii",
                "strain": "strain=DSM 3353",
                "accession": "GCA_000173975.1",
                "taxid": 39488,
                "species_taxid": 39488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2705,
                "matched_fragments": 53,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea longicatena",
                "strain": "strain=DSM 13814",
                "accession": "GCA_025150085.1",
                "taxid": 88431,
                "species_taxid": 88431,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0189,
                "matched_fragments": 51,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea longicatena",
                "strain": "strain=DSM 13814",
                "accession": "GCA_000154065.1",
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                "species_taxid": 88431,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9683,
                "matched_fragments": 53,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes hadrus",
                "strain": "strain=DSM 3319",
                "accession": "GCA_000332875.2",
                "taxid": 649756,
                "species_taxid": 649756,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9299,
                "matched_fragments": 50,
                "total_fragments": 952,
                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
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        "gtdb_result": [
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                "ani_circumscription_radius": 95.0,
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                "status": "conclusive"
            },
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                "accession": "GCA_902762905.1",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
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                "mean_intra_species_ani": "98.51",
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                "gtdb_species": "s__CAG-590 sp017622535",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.239,
        "cell_length": 0.277,
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        "growth_tmp": 37.0,
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        "bacillus_cell_shape": 0.8,
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        "coccobacillus_cell_shape": 0.033,
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
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    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
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        "s__CAG-590 sp900552885",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "CAG-590",
        "CAG-590",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}