{ "type": "genome", "identifier": "GCA_934403705.1", "organism": "uncultured Blautia sp.", "title": "uncultured Blautia sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "stanford university school of medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934403705.1", "bioproject": "PRJEB49206", "biosample": "SAMEA13471502", "wgs_master": "CAKRUP000000000.1", "refseq_category": "na", "taxid": "765821", "species_taxid": "765821", "organism_name": "uncultured Blautia sp.", "infraspecific_name": "", "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_5_THA1056YZ.47", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/16", "asm_name": "ERR7738535_bin.47", "submitter": "stanford university school of medicine", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/403/705/GCA_934403705.1_ERR7738535_bin.47", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-16", "dateModified": "2022-04-16", "datePublished": "2022-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Blautia sp." ], "sample_taxid": [ "765821" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Nepal" ], "sample_host_location_id": [], "data_size": "0.704 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 64.08, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2431077", "Number of Sequences": "511", "Longest Sequences (bp)": "23811", "N50 (bp)": "5984", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.6", "Number of CDSs": "1714", "Average Protein Length": "305.4", "Coding Ratio (%)": "64.6", "Number of rRNAs": "0", "Number of tRNAs": "11", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Blautia obeum", "strain": "strain=ATCC 29174", "accession": "GCA_000153905.1", "taxid": 40520, "species_taxid": 40520, "relation_to_type": "type", "validated": true, "ani": 78.5145, "matched_fragments": 106, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia obeum", "strain": "strain=ATCC 29174", "accession": "GCA_025147765.1", "taxid": 40520, "species_taxid": 40520, "relation_to_type": "type", "validated": true, "ani": 78.5118, "matched_fragments": 108, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia massiliensis", "strain": "strain=GD9", "accession": "GCA_001487165.1", "taxid": 1737424, "species_taxid": 1737424, "relation_to_type": "type", "validated": true, "ani": 78.3046, "matched_fragments": 130, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia luti", "strain": "strain=DSM 14534", "accession": "GCA_009707925.1", "taxid": 89014, "species_taxid": 89014, "relation_to_type": "suspected-type", "validated": true, "ani": 77.9091, "matched_fragments": 149, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia wexlerae", "strain": "strain=DSM 19850", "accession": "GCA_000484655.1", "taxid": 418240, "species_taxid": 418240, "relation_to_type": "suspected-type", "validated": true, "ani": 77.8905, "matched_fragments": 147, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia wexlerae", "strain": "strain=DSM 19850", "accession": "GCA_025148125.1", "taxid": 418240, "species_taxid": 418240, "relation_to_type": "suspected-type", "validated": true, "ani": 77.8669, "matched_fragments": 155, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia intestinalis", "strain": "strain=27-44", "accession": "GCA_014297355.1", "taxid": 2763028, "species_taxid": 2763028, "relation_to_type": "type", "validated": true, "ani": 77.7979, "matched_fragments": 110, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia caecimuris", "strain": "strain=DSM 29492", "accession": "GCA_024622975.1", "taxid": 1796615, "species_taxid": 1796615, "relation_to_type": "type", "validated": true, "ani": 77.2805, "matched_fragments": 95, "total_fragments": 531, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 64.08, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_016908695.1", "gtdb_species": "s__Blautia_A faecis", "ani": 98.3596, "matched_fragments": 510, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.52", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.69", "num_clustered_genomes": 30, "status": "conclusive" }, { "accession": "GCA_905206915.1", "gtdb_species": "s__Blautia_A sp905206915", "ani": 86.986, "matched_fragments": 287, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003460605.1", "gtdb_species": "s__Blautia_A sp900066145", "ani": 83.2373, "matched_fragments": 395, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.04", "min_intra_species_ani": "98.72", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.85", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCA_900763175.1", "gtdb_species": "s__Blautia_A sp900763175", "ani": 82.0263, "matched_fragments": 290, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000153905.1", "gtdb_species": "s__Blautia_A obeum", "ani": 78.5145, "matched_fragments": 106, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.25", "min_intra_species_ani": "97.20", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.75", "num_clustered_genomes": 45, "status": "-" }, { "accession": "GCF_009883055.1", "gtdb_species": "s__Blautia_A sp900548245", "ani": 78.4224, "matched_fragments": 120, "total_fragments": 531, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.37", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.85", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_003477525.1", "gtdb_species": "s__Blautia_A sp003477525", "ani": 78.0442, 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