{ "type": "genome", "identifier": "GCA_934447855.1", "organism": "uncultured Ruminiclostridium sp.", "title": "uncultured Ruminiclostridium sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "stanford university school of medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934447855.1", "bioproject": "PRJEB49206", "biosample": "SAMEA13518397", "wgs_master": "CAKSEV000000000.1", "refseq_category": "na", "taxid": "1757166", "species_taxid": "1757166", "organism_name": "uncultured Ruminiclostridium sp.", "infraspecific_name": "", "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_O_24_2672.34", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/16", "asm_name": "ERR7738159_bin.34", "submitter": "stanford university school of medicine", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/447/855/GCA_934447855.1_ERR7738159_bin.34", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-16", "dateModified": "2022-04-16", "datePublished": "2022-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Ruminiclostridium sp." ], "sample_taxid": [ "1757166" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tanzania" ], "sample_host_location_id": [], "data_size": "0.759 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, 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"N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.323, "cell_length": 0.344, "doubling_h": 0.68, "growth_tmp": 42.778, "optimum_tmp": 44.651, "optimum_ph": 6.992, "genome_size": 4065938.421, "gc_content": 42.626, "coding_genes": 3012.312, "rRNA16S_genes": 5.0, "tRNA_genes": 57.533, "gram_stain": 0.9, "sporulation": 0.941, "motility": 0.785, "range_salinity": 0.0, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 0.75, "thermophilic_range_tmp": 0.25, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.933, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.066, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Bacillota_A", "c__Clostridia", "o__Oscillospirales", "f__Ruminococcaceae", "g__Ruminiclostridium_E", "s__Ruminiclostridium_E siraeum" ], "_genome_taxon": [ "uncultured", 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