{
    "type": "genome",
    "identifier": "GCA_934540975.1",
    "organism": "uncultured Oscillospiraceae bacterium",
    "title": "uncultured Oscillospiraceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934540975.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13518761",
        "wgs_master": "CAKTCX000000000.1",
        "refseq_category": "na",
        "taxid": "707003",
        "species_taxid": "707003",
        "organism_name": "uncultured Oscillospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_11_CHE0005SZ.84",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/15",
        "asm_name": "ERR7738515_bin.84",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/540/975/GCA_934540975.1_ERR7738515_bin.84",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-15",
    "dateModified": "2022-04-15",
    "datePublished": "2022-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Oscillospiraceae bacterium"
        ],
        "sample_taxid": [
            "707003"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Nepal"
        ],
        "sample_host_location_id": [],
        "data_size": "0.561 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2005823",
        "Number of Sequences": "26",
        "Longest Sequences (bp)": "435604",
        "N50 (bp)": "148214",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.7",
        "Number of CDSs": "1851",
        "Average Protein Length": "321.7",
        "Coding Ratio (%)": "89.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 2841504,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
                "organism_name": "Flavonifractor plautii",
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                "species_taxid": 292800,
                "relation_to_type": "suspected-type",
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                "organism_name": "Pseudoflavonifractor gallinarum",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "accession": "GCA_010508875.1",
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                "species_taxid": 292800,
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            {
                "organism_name": "Vescimonas coprocola",
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                "accession": "GCA_018408575.1",
                "taxid": 2714355,
                "species_taxid": 2714355,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysosmobacter welbionis",
                "strain": "strain=J115",
                "accession": "GCA_005121165.3",
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                "species_taxid": 2093857,
                "relation_to_type": "type",
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                "matched_fragments": 76,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vescimonas fastidiosa",
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                "accession": "GCA_018326305.1",
                "taxid": 2714353,
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                "relation_to_type": "type",
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                "ani": 76.6708,
                "matched_fragments": 54,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotruncus massiliensis",
                "strain": "strain=AT3",
                "accession": "GCA_900199635.1",
                "taxid": 1673720,
                "species_taxid": 1673720,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Intestinimonas butyriciproducens",
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                "accession": "GCA_003096335.1",
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                "validated": true,
                "ani": 76.0608,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Variovorax boronicumulans",
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                "accession": "GCA_001591345.1",
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                "relation_to_type": "type",
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                "matched_fragments": 52,
                "total_fragments": 656,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
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        "gtdb_result": [
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                "accession": "GCA_900543625.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-103",
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                "min_intra_species_ani": "95.23",
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                "num_clustered_genomes": 12,
                "status": "conclusive"
            },
            {
                "accession": "GCA_000432375.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "cell_length": 0.397,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
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    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}