{
    "type": "genome",
    "identifier": "GCA_934552765.1",
    "organism": "uncultured Eubacterium sp.",
    "title": "uncultured Eubacterium sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934552765.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13521297",
        "wgs_master": "CAKTEO000000000.1",
        "refseq_category": "na",
        "taxid": "165185",
        "species_taxid": "165185",
        "organism_name": "uncultured Eubacterium sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_A_2_1112.108",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/15",
        "asm_name": "ERR7746411_bin.108",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/552/765/GCA_934552765.1_ERR7746411_bin.108",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-15",
    "dateModified": "2022-04-15",
    "datePublished": "2022-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Eubacterium sp."
        ],
        "sample_taxid": [
            "165185"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.567 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2029219",
        "Number of Sequences": "8",
        "Longest Sequences (bp)": "489102",
        "N50 (bp)": "450927",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.4",
        "Number of CDSs": "1910",
        "Average Protein Length": "325.1",
        "Coding Ratio (%)": "91.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Eubacterium coprostanoligenes",
                "strain": "strain=ATCC 51222",
                "accession": "GCA_900167205.1",
                "taxid": 290054,
                "species_taxid": 290054,
                "relation_to_type": "type",
                "validated": true,
                "ani": 89.6089,
                "matched_fragments": 494,
                "total_fragments": 673,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900539325.1",
                "gtdb_species": "s__Eubacterium_R sp900539325",
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                "matched_fragments": 573,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.44",
                "min_intra_species_ani": "97.34",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_900167205.1",
                "gtdb_species": "s__Eubacterium_R coprostanoligenes",
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                "matched_fragments": 496,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.02",
                "min_intra_species_ani": "97.98",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900766895.1",
                "gtdb_species": "s__Eubacterium_R sp900766895",
                "ani": 81.0935,
                "matched_fragments": 310,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900772705.1",
                "gtdb_species": "s__Eubacterium_R sp900772705",
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                "matched_fragments": 194,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900539165.1",
                "gtdb_species": "s__Eubacterium_R sp900539165",
                "ani": 79.8352,
                "matched_fragments": 293,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900542875.1",
                "gtdb_species": "s__Eubacterium_R sp900542875",
                "ani": 79.5448,
                "matched_fragments": 257,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.37",
                "min_intra_species_ani": "97.10",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_017514345.1",
                "gtdb_species": "s__Eubacterium_R sp017514345",
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                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017445905.1",
                "gtdb_species": "s__Eubacterium_R sp017445905",
                "ani": 77.5959,
                "matched_fragments": 128,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015065505.1",
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                "ani": 77.4616,
                "matched_fragments": 148,
                "total_fragments": 673,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017543415.1",
                "gtdb_species": "s__Eubacterium_R sp017543415",
                "ani": 76.7359,
                "matched_fragments": 69,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Eubacterium_R",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.325,
        "cell_length": 0.215,
        "doubling_h": null,
        "growth_tmp": 36.972,
        "optimum_tmp": 37.071,
        "optimum_ph": null,
        "genome_size": 3245697.074,
        "gc_content": 41.131,
        "coding_genes": 3227.555,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 59.583,
        "gram_stain": 0.95,
        "sporulation": 0.0,
        "motility": 0.5,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Acutalibacteraceae",
        "g__Eubacterium_R",
        "s__Eubacterium_R sp900539325"
    ],
    "_genome_taxon": [
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        "Eubacterium",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__Eubacterium_R",
        "s__Eubacterium_R sp900539325",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Acutalibacteraceae",
        "Eubacterium",
        "R",
        "Eubacterium",
        "R",
        "sp900539325"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}