{
    "type": "genome",
    "identifier": "GCA_934552845.1",
    "organism": "uncultured Butyricicoccus sp.",
    "title": "uncultured Butyricicoccus sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934552845.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13485685",
        "wgs_master": "CAKTET000000000.1",
        "refseq_category": "na",
        "taxid": "1193532",
        "species_taxid": "1193532",
        "organism_name": "uncultured Butyricicoccus sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_B_19_1591.110",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7745563_bin.110",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/552/845/GCA_934552845.1_ERR7745563_bin.110",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Butyricicoccus sp."
        ],
        "sample_taxid": [
            "1193532"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.696 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2443624",
        "Number of Sequences": "48",
        "Longest Sequences (bp)": "152068",
        "N50 (bp)": "93372",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.7",
        "Number of CDSs": "2322",
        "Average Protein Length": "308.4",
        "Coding Ratio (%)": "87.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Butyricicoccus intestinisimiae",
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                "accession": "GCA_018918345.1",
                "taxid": 2841509,
                "species_taxid": 2841509,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Butyricicoccus porcorum",
                "strain": "strain=BB10",
                "accession": "GCA_002157465.1",
                "taxid": 1945634,
                "species_taxid": 1945634,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.0138,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricicoccus pullicaecorum",
                "strain": "strain=DSM 23266",
                "accession": "GCA_900167005.1",
                "taxid": 501571,
                "species_taxid": 501571,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9037,
                "matched_fragments": 92,
                "total_fragments": 795,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricicoccus faecihominis",
                "strain": "strain=JCM 31056",
                "accession": "GCA_014648015.1",
                "taxid": 1712515,
                "species_taxid": 1712515,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7133,
                "matched_fragments": 141,
                "total_fragments": 795,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricicoccus faecihominis",
                "strain": "strain=JCM 31056",
                "accession": "GCA_016586375.1",
                "taxid": 1712515,
                "species_taxid": 1712515,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5684,
                "matched_fragments": 137,
                "total_fragments": 795,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agathobaculum desmolans",
                "strain": "strain=ATCC 43058",
                "accession": "GCA_000701665.1",
                "taxid": 39484,
                "species_taxid": 39484,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7853,
                "matched_fragments": 89,
                "total_fragments": 795,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_018918345.1",
                "gtdb_species": "s__Butyricicoccus_A sp002395695",
                "ani": 95.87,
                "matched_fragments": 702,
                "total_fragments": 795,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Butyricicoccus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.08",
                "min_intra_species_ani": "98.03",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_004555915.1",
                "gtdb_species": "s__Butyricicoccus_A sp004555915",
                "ani": 80.3668,
                "matched_fragments": 357,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Butyricicoccus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.18",
                "min_intra_species_ani": "99.18",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002157465.1",
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                "ani": 80.0103,
                "matched_fragments": 349,
                "total_fragments": 795,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Butyricicoccus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "99.36",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_019112985.1",
                "gtdb_species": "s__Butyricicoccus_A stercorigallinarum",
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                "matched_fragments": 271,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Butyricicoccus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002449635.1",
                "gtdb_species": "s__Butyricicoccus_A sp002449635",
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                "matched_fragments": 235,
                "total_fragments": 795,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Butyricicoccus_A",
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                "mean_intra_species_af": "0.85",
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                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_016293155.1",
                "gtdb_species": "s__JAEDEU01 sp016293155",
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                "matched_fragments": 185,
                "total_fragments": 795,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__JAEDEU01",
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                "status": "-"
            },
            {
                "accession": "GCF_003481705.1",
                "gtdb_species": "s__Agathobaculum sp003481705",
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                "matched_fragments": 111,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Agathobaculum",
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                "mean_intra_species_ani": "98.33",
                "min_intra_species_ani": "96.26",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_900625105.1",
                "gtdb_species": "s__Agathobaculum sp900625105",
                "ani": 77.1171,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Butyricicoccaceae;g__Agathobaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": 0.079,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 42.0,
        "optimum_ph": 6.0,
        "genome_size": 3285179.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Butyricicoccaceae",
        "g__Butyricicoccus_A",
        "s__Butyricicoccus_A intestinisimiae"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Butyricicoccaceae",
        "g__Butyricicoccus_A",
        "s__Butyricicoccus_A intestinisimiae",
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        "Bacillota",
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        "Clostridia",
        "Oscillospirales",
        "Butyricicoccaceae",
        "Butyricicoccus",
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        "Butyricicoccus",
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        "intestinisimiae"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}