{ "tc_result": [ { "organism_name": "Oscillibacter ruminantium", "strain": "strain=GH1", "accession": "GCA_000307265.1", "taxid": 1263547, "species_taxid": 1263547, "relation_to_type": "type", "validated": true, "ani": 81.5593, "matched_fragments": 443, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dysosmobacter welbionis", "strain": "strain=J115", "accession": "GCA_005121165.3", "taxid": 2093857, "species_taxid": 2093857, "relation_to_type": "type", "validated": true, "ani": 79.9854, "matched_fragments": 362, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dysosmobacter acutus", "strain": "strain=MSJ-2", "accession": "GCA_018919205.1", "taxid": 2841504, "species_taxid": 2841504, "relation_to_type": "type", "validated": true, "ani": 78.9046, "matched_fragments": 268, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vescimonas coprocola", "strain": "strain=MM50", "accession": "GCA_018408575.1", "taxid": 2714355, "species_taxid": 2714355, "relation_to_type": "type", "validated": true, "ani": 78.5973, "matched_fragments": 191, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillibacter faecalis", "strain": "strain=MM59", "accession": "GCA_018408705.1", "taxid": 2714358, "species_taxid": 2714358, "relation_to_type": "type", "validated": true, "ani": 78.3205, "matched_fragments": 226, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vescimonas fastidiosa", "strain": "strain=MM35", "accession": "GCA_018326305.1", "taxid": 2714353, "species_taxid": 2714353, "relation_to_type": "type", "validated": true, "ani": 77.9869, "matched_fragments": 147, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavonifractor plautii", "strain": "strain=ATCC 29863", "accession": "GCA_000239295.1", "taxid": 292800, "species_taxid": 292800, "relation_to_type": "suspected-type", "validated": true, "ani": 77.8651, "matched_fragments": 172, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoflavonifractor gallinarum", "strain": "strain=DSM 107456", "accession": "GCA_014982855.1", "taxid": 2779352, "species_taxid": 2779352, "relation_to_type": "type", "validated": true, "ani": 77.7102, "matched_fragments": 165, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium phoceensis", "strain": "strain=GD3", "accession": "GCA_001244495.1", "taxid": 1650661, "species_taxid": 1650661, "relation_to_type": "type", "validated": true, "ani": 77.5315, "matched_fragments": 182, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Intestinimonas butyriciproducens", "strain": "strain=DSM 26588", "accession": "GCA_024622565.1", "taxid": 1297617, "species_taxid": 1297617, "relation_to_type": "type", "validated": true, "ani": 77.0103, "matched_fragments": 124, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalibacterium hattorii", "strain": "strain=APC922/41-1", "accession": "GCA_003287455.1", "taxid": 2935520, "species_taxid": 2935520, "relation_to_type": "type", "validated": true, "ani": 76.75, "matched_fragments": 88, "total_fragments": 717, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 98.61, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000307265.1", "gtdb_species": "s__Oscillibacter ruminantium", "ani": 81.5593, "matched_fragments": 443, "total_fragments": 717, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "98.68", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000283575.1", "gtdb_species": "s__Oscillibacter valericigenes", "ani": 81.1344, "matched_fragments": 437, "total_fragments": 717, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Oscillibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016902445.1", "gtdb_species": "s__Dysosmobacter avistercoris", "ani": 80.8819, "matched_fragments": 348, "total_fragments": 717, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Dysosmobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.12", "min_intra_species_ani": "97.84", "mean_intra_species_af": "0.91", 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"d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Onthomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }