{ "type": "genome", "identifier": "GCA_934630905.1", "organism": "uncultured Eggerthellaceae bacterium", "title": "uncultured Eggerthellaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "stanford university school of medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934630905.1", "bioproject": "PRJEB49206", "biosample": "SAMEA13502673", "wgs_master": "CAKTXN000000000.1", "refseq_category": "na", "taxid": "2321402", "species_taxid": "2321402", "organism_name": "uncultured Eggerthellaceae bacterium", "infraspecific_name": "", "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_K_17_1778.362", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/16", "asm_name": "ERR7738598_bin.362", "submitter": "stanford university school of medicine", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/630/905/GCA_934630905.1_ERR7738598_bin.362", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-16", "dateModified": "2022-04-16", "datePublished": "2022-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Eggerthellaceae bacterium" ], "sample_taxid": [ "2321402" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tanzania" ], "sample_host_location_id": [], "data_size": "0.682 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 83.33, "contamination": 0.46, 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"below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.46, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_017440565.1", "gtdb_species": "s__RGIG3135 sp017440565", "ani": 77.2601, "matched_fragments": 66, "total_fragments": 630, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__RGIG3135", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003340345.1", "gtdb_species": "s__Paraeggerthella hongkongensis_A", "ani": 77.107, "matched_fragments": 51, "total_fragments": 630, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__Paraeggerthella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.75", "min_intra_species_ani": "98.26", 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"num_clustered_genomes": 4, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.364, "cell_length": 0.056, "doubling_h": null, "growth_tmp": 37.0, "optimum_tmp": 37.1, "optimum_ph": 7.175, "genome_size": 2742939.573, "gc_content": 59.375, "coding_genes": 2246.12, "rRNA16S_genes": 2.375, "tRNA_genes": 47.375, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.1, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.833, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.166, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Actinomycetota", "c__Coriobacteriia", "o__Coriobacteriales", "f__Eggerthellaceae", "g__CAKUOV01", "s__CAKUOV01 sp934630905" ], "_genome_taxon": [ "uncultured", "Eggerthellaceae", "bacterium", 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