{
    "type": "genome",
    "identifier": "GCA_934643785.1",
    "organism": "uncultured Bifidobacterium sp.",
    "title": "uncultured Bifidobacterium sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934643785.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13505476",
        "wgs_master": "CAKUCU000000000.1",
        "refseq_category": "na",
        "taxid": "165187",
        "species_taxid": "165187",
        "organism_name": "uncultured Bifidobacterium sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_E_24_1866.217",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/15",
        "asm_name": "ERR7745594_bin.217",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/643/785/GCA_934643785.1_ERR7745594_bin.217",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-15",
    "dateModified": "2022-04-15",
    "datePublished": "2022-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Bifidobacterium sp."
        ],
        "sample_taxid": [
            "165187"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Tanzania"
        ],
        "sample_host_location_id": [],
        "data_size": "0.620 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2207017",
        "Number of Sequences": "7",
        "Longest Sequences (bp)": "1225332",
        "N50 (bp)": "1225332",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.3",
        "Number of CDSs": "1776",
        "Average Protein Length": "364.5",
        "Coding Ratio (%)": "88.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "55",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bifidobacterium adolescentis",
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                "taxid": 1680,
                "species_taxid": 1680,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.5525,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bifidobacterium adolescentis",
                "strain": "strain=ATCC 15703",
                "accession": "GCA_000010425.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 97.3887,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bifidobacterium ruminantium",
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                "accession": "GCA_000687635.1",
                "taxid": 78346,
                "species_taxid": 78346,
                "relation_to_type": "type",
                "validated": true,
                "ani": 89.1018,
                "matched_fragments": 544,
                "total_fragments": 732,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium ruminantium",
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                "accession": "GCA_000770925.1",
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                "species_taxid": 78346,
                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 732,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium catenulatum",
                "strain": "strain=DSM 16992",
                "accession": "GCA_000771025.1",
                "taxid": 1686,
                "species_taxid": 1686,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.6468,
                "matched_fragments": 454,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium catenulatum subsp. kashiwanohense",
                "strain": "strain=DSM 21854",
                "accession": "GCA_000771545.1",
                "taxid": 630129,
                "species_taxid": 1686,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.2644,
                "matched_fragments": 470,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium catenulatum subsp. kashiwanohense",
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                "accession": "GCA_000741605.1",
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                "species_taxid": 1686,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.2565,
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                "status": "below_threshold"
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            {
                "organism_name": "Bifidobacterium pseudocatenulatum",
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                "accession": "GCA_000771445.1",
                "taxid": 28026,
                "species_taxid": 28026,
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                "ani": 84.1254,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium catenulatum subsp. kashiwanohense",
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                "accession": "GCA_001042615.1",
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                "validated": true,
                "ani": 84.11,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium moukalabense",
                "strain": "strain=DSM 27321",
                "accession": "GCA_000522505.1",
                "taxid": 1333651,
                "species_taxid": 1333651,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.4901,
                "matched_fragments": 479,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium amazonense",
                "strain": "strain=MA1",
                "accession": "GCA_018555435.2",
                "taxid": 2809027,
                "species_taxid": 2809027,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.6706,
                "matched_fragments": 362,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium pseudolongum subsp. pseudolongum",
                "strain": "strain=ATCC 25526",
                "accession": "GCA_022691205.1",
                "taxid": 31954,
                "species_taxid": 1694,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6404,
                "matched_fragments": 260,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_000010425.1",
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                "matched_fragments": 609,
                "total_fragments": 732,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium",
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                "mean_intra_species_ani": "98.09",
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                "status": "-"
            },
            {
                "accession": "GCF_001025195.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium",
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                "status": "-"
            },
            {
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                "status": "-"
            },
            {
                "accession": "GCF_001025215.1",
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                "mean_intra_species_ani": "98.12",
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            {
                "accession": "GCF_001042615.1",
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            {
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCF_002742445.1",
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            {
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            {
                "accession": "GCF_001042595.1",
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    "_bac2feature": {
        "phenotypes": null,
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    "_gtdb_taxon": [
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        "g__Bifidobacterium",
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    "_genome_taxon": [
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        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Bifidobacteriaceae",
        "g__Bifidobacterium",
        "s__Bifidobacterium adolescentis",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Bifidobacteriaceae",
        "Bifidobacterium",
        "Bifidobacterium",
        "adolescentis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}