{
    "type": "genome",
    "identifier": "GCA_934700355.1",
    "organism": "uncultured Odoribacter sp.",
    "title": "uncultured Odoribacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934700355.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13483738",
        "wgs_master": "CAKUXQ000000000.1",
        "refseq_category": "na",
        "taxid": "876416",
        "species_taxid": "876416",
        "organism_name": "uncultured Odoribacter sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_SUBJECT_CONTIGS_1500_ASSEMBLY_K77_MERGED__Pilot_MoBio_Fiber_G_11_1024.216",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7738547_bin.216",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/700/355/GCA_934700355.1_ERR7738547_bin.216",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Odoribacter sp."
        ],
        "sample_taxid": [
            "876416"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.948 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.15,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3314780",
        "Number of Sequences": "68",
        "Longest Sequences (bp)": "202819",
        "N50 (bp)": "120027",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.3",
        "Number of CDSs": "2501",
        "Average Protein Length": "379.3",
        "Coding Ratio (%)": "85.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Odoribacter splanchnicus",
                "strain": "strain=DSM 220712",
                "accession": "GCA_000190535.1",
                "taxid": 28118,
                "species_taxid": 28118,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7369,
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                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Odoribacter splanchnicus",
                "strain": "strain=NCTC10825",
                "accession": "GCA_900187175.1",
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                "species_taxid": 28118,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.718,
                "matched_fragments": 216,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Odoribacter laneus",
                "strain": "strain=YIT 12061",
                "accession": "GCA_000243215.1",
                "taxid": 626933,
                "species_taxid": 626933,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9542,
                "matched_fragments": 114,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Culturomica massiliensis",
                "strain": "strain=Marseille-P2698",
                "accession": "GCA_900091655.1",
                "taxid": 1841857,
                "species_taxid": 1841857,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8059,
                "matched_fragments": 176,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sanguibacteroides justesenii",
                "strain": "strain=OUH 308042",
                "accession": "GCA_000832075.1",
                "taxid": 1547597,
                "species_taxid": 1547597,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.673,
                "matched_fragments": 69,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas virosa",
                "strain": "strain=DSM 23226",
                "accession": "GCA_025148635.1",
                "taxid": 544645,
                "species_taxid": 544645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3305,
                "matched_fragments": 78,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas virosa",
                "strain": "strain=DSM 23226",
                "accession": "GCA_000519105.1",
                "taxid": 544645,
                "species_taxid": 544645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3082,
                "matched_fragments": 79,
                "total_fragments": 1071,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.15,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_900544025.1",
                "gtdb_species": "s__Odoribacter sp900544025",
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                "matched_fragments": 932,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.76",
                "min_intra_species_ani": "97.68",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
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                "matched_fragments": 882,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000190535.1",
                "gtdb_species": "s__Odoribacter splanchnicus",
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                "matched_fragments": 216,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "98.34",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 51,
                "status": "-"
            },
            {
                "accession": "GCA_900548135.1",
                "gtdb_species": "s__Odoribacter sp900548135",
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                "matched_fragments": 129,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905215395.1",
                "gtdb_species": "s__Odoribacter sp905215395",
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                "matched_fragments": 144,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009935865.1",
                "gtdb_species": "s__Odoribacter sp009935865",
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                "matched_fragments": 168,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.00",
                "min_intra_species_ani": "98.96",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_905216195.1",
                "gtdb_species": "s__Odoribacter sp905216195",
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                "matched_fragments": 124,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900762515.1",
                "gtdb_species": "s__Odoribacter sp900762515",
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                "matched_fragments": 164,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900091655.1",
                "gtdb_species": "s__Odoribacter massiliensis",
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                "matched_fragments": 175,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
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                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 6,
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            },
            {
                "accession": "GCA_900543425.1",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905204385.1",
                "gtdb_species": "s__Odoribacter sp905204385",
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                "matched_fragments": 128,
                "total_fragments": 1071,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Odoribacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900761485.1",
                "gtdb_species": "s__Butyricimonas sp900761485",
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                "matched_fragments": 73,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.133,
        "cell_length": 0.362,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": 7.0,
        "genome_size": 4072859.214,
        "gc_content": 43.387,
        "coding_genes": 3542.25,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 59.667,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "f__Marinifilaceae",
        "g__Odoribacter",
        "s__Odoribacter sp900544025"
    ],
    "_genome_taxon": [
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        "Odoribacter",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Marinifilaceae",
        "g__Odoribacter",
        "s__Odoribacter sp900544025",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Marinifilaceae",
        "Odoribacter",
        "Odoribacter",
        "sp900544025"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}