{
    "type": "genome",
    "identifier": "GCA_934754325.1",
    "organism": "uncultured Intestinibacter sp.",
    "title": "uncultured Intestinibacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "stanford university school of medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_934754325.1",
        "bioproject": "PRJEB49206",
        "biosample": "SAMEA13489448",
        "wgs_master": "CAKVJD000000000.1",
        "refseq_category": "na",
        "taxid": "1505659",
        "species_taxid": "1505659",
        "organism_name": "uncultured Intestinibacter sp.",
        "infraspecific_name": "",
        "isolate": "REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_H_21_RAJ1012YZ.15",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/16",
        "asm_name": "ERR7738426_bin.15",
        "submitter": "stanford university school of medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/754/325/GCA_934754325.1_ERR7738426_bin.15",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-16",
    "dateModified": "2022-04-16",
    "datePublished": "2022-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Intestinibacter sp."
        ],
        "sample_taxid": [
            "1505659"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Nepal"
        ],
        "sample_host_location_id": [],
        "data_size": "0.774 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2787906",
        "Number of Sequences": "157",
        "Longest Sequences (bp)": "141153",
        "N50 (bp)": "36417",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "28.7",
        "Number of CDSs": "2473",
        "Average Protein Length": "307.9",
        "Coding Ratio (%)": "81.9",
        "Number of rRNAs": "4",
        "Number of tRNAs": "7",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Intestinibacter bartlettii",
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                "species_taxid": 261299,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 705,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Intestinibacter bartlettii",
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                "accession": "GCA_025148965.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_900167285.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 704,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter mayombei",
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                "accession": "GCA_020748465.1",
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                "species_taxid": 1541,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 272,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter othiniensis",
                "strain": "strain=08-306576",
                "accession": "GCA_000808015.1",
                "taxid": 1577792,
                "species_taxid": 1577792,
                "relation_to_type": "type",
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                "matched_fragments": 311,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter petrolearius",
                "strain": "strain=LAM0A37",
                "accession": "GCA_020748185.1",
                "taxid": 1460447,
                "species_taxid": 1460447,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5087,
                "matched_fragments": 285,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter glycolicus",
                "strain": "strain=DSM 1288",
                "accession": "GCA_000439105.1",
                "taxid": 36841,
                "species_taxid": 36841,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.3243,
                "matched_fragments": 314,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia timonensis",
                "strain": "strain=Marseille-P326",
                "accession": "GCA_900106845.1",
                "taxid": 1776391,
                "species_taxid": 1776391,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2121,
                "matched_fragments": 247,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia ilealis",
                "strain": "strain=CRIB",
                "accession": "GCA_900015215.1",
                "taxid": 1115758,
                "species_taxid": 1115758,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8411,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paeniclostridium sordellii",
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                "accession": "GCA_000953675.1",
                "taxid": 1505,
                "species_taxid": 1505,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 225,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Clostridium mobile",
                "strain": "strain=MSJ-11",
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                "taxid": 2841512,
                "species_taxid": 2841512,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0406,
                "matched_fragments": 51,
                "total_fragments": 849,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_015667935.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Intestinibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.12",
                "min_intra_species_ani": "98.96",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_018917435.1",
                "gtdb_species": "s__Intestinibacter bartlettii_A",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Intestinibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Intestinibacter",
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                "mean_intra_species_ani": "98.74",
                "min_intra_species_ani": "98.25",
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                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_900557165.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
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                "mean_intra_species_ani": "99.06",
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                "mean_intra_species_af": "0.78",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902363255.1",
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                "matched_fragments": 320,
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017425305.1",
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            {
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            },
            {
                "accession": "GCA_902362365.1",
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            {
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            {
                "accession": "GCA_900550335.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "cell_length": null,
        "doubling_h": null,
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        "genome_size": null,
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        "bacillus_cell_shape": null,
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    },
    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "A",
        "Clostridia",
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        "Peptostreptococcaceae",
        "Intestinibacter",
        "Intestinibacter",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}