{ "type": "genome", "identifier": "GCA_934849455.1", "organism": "Clostridium sp. AF02-29", "title": "Clostridium sp. AF02-29", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "UNIVERSITY OF NEW SOUTH WALES", "publication": [ {} ], "properties": { "assembly_accession": "GCA_934849455.1", "bioproject": "PRJEB50699", "biosample": "SAMEA13566746", "wgs_master": "CAKWSH000000000.1", "refseq_category": "na", "taxid": "2292993", "species_taxid": "2292993", "organism_name": "Clostridium sp. AF02-29", "infraspecific_name": "", "isolate": "MTG234_bin.4.fa", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/07/30", "asm_name": "MTG234_bin.4.fa", "submitter": "UNIVERSITY OF NEW SOUTH WALES", "gbrs_paired_asm": "GCF_934849455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/934/849/455/GCA_934849455.1_MTG234_bin.4.fa", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-07-30", "dateModified": "2022-07-30", "datePublished": "2022-07-30", "_annotation": { "sample_count": 1, "sample_organism": [ "Clostridium sp. AF02-29" ], "sample_taxid": [ "2292993" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "0.725 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 90.62, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2542288", "Number of Sequences": "84", "Longest Sequences (bp)": "270001", "N50 (bp)": "153432", "Gap Ratio (%)": "0.003933", "GCcontent (%)": "48.9", "Number of CDSs": "2236", "Average Protein Length": "324.1", "Coding Ratio (%)": "85.5", "Number of rRNAs": "0", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Clostridium fessum", "strain": "strain=SNUG30386", "accession": 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