{
    "type": "genome",
    "identifier": "GCA_937128765.1",
    "organism": "uncultured Chroococcidiopsis sp.",
    "title": "uncultured Chroococcidiopsis sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937128765.1",
        "bioproject": "PRJEB51071",
        "biosample": "SAMEA13959255",
        "wgs_master": "CAKZMT000000000.1",
        "refseq_category": "na",
        "taxid": "259957",
        "species_taxid": "259957",
        "organism_name": "uncultured Chroococcidiopsis sp.",
        "infraspecific_name": "",
        "isolate": "SRR5214706_bin.57_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/11",
        "asm_name": "SRR5214706_bin.57_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/128/765/GCA_937128765.1_SRR5214706_bin.57_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-11",
    "dateModified": "2023-01-11",
    "datePublished": "2023-01-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Chroococcidiopsis sp."
        ],
        "sample_taxid": [
            "259957"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Africa"
        ],
        "sample_host_location_id": [],
        "data_size": "1.117 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 82.65,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3820075",
        "Number of Sequences": "1625",
        "Longest Sequences (bp)": "19450",
        "N50 (bp)": "2630",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.2",
        "Number of CDSs": "2213",
        "Average Protein Length": "239.6",
        "Coding Ratio (%)": "41.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Gloeocapsopsis crepidinum",
                "strain": "strain=LEGE 06123",
                "accession": "GCA_015207655.1",
                "taxid": 693223,
                "species_taxid": 693223,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.2939,
                "matched_fragments": 317,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gloeocapsopsis dulcis",
                "strain": "strain=AAB1",
                "accession": "GCA_002964865.1",
                "taxid": 2859516,
                "species_taxid": 2859516,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.0132,
                "matched_fragments": 295,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 82.65,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_002939305.1",
                "gtdb_species": "s__Chroogloeocystis sp002939305",
                "ani": 98.2169,
                "matched_fragments": 382,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroogloeocystis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000317555.1",
                "gtdb_species": "s__Chroogloeocystis sp000317555",
                "ani": 88.6492,
                "matched_fragments": 359,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroogloeocystis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001904655.1",
                "gtdb_species": "s__Chroogloeocystis siderophila",
                "ani": 87.7962,
                "matched_fragments": 357,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroogloeocystis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_015207655.1",
                "gtdb_species": "s__Gloeocapsopsis crepidinum",
                "ani": 82.2939,
                "matched_fragments": 317,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Gloeocapsopsis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002749975.1",
                "gtdb_species": "s__Gloeocapsopsis sp002749975",
                "ani": 82.1399,
                "matched_fragments": 317,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Gloeocapsopsis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002964865.1",
                "gtdb_species": "s__Gloeocapsopsis dulcis",
                "ani": 82.0302,
                "matched_fragments": 294,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Gloeocapsopsis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 22.0,
        "optimum_tmp": null,
        "optimum_ph": 8.0,
        "genome_size": 6689400.8,
        "gc_content": 44.512,
        "coding_genes": 5710.0,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 46.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__Cyanobacteriales",
        "f__Chroococcidiopsidaceae",
        "g__Chroogloeocystis",
        "s__Chroogloeocystis sp002939305"
    ],
    "_genome_taxon": [
        "uncultured",
        "Chroococcidiopsis",
        "sp.",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__Cyanobacteriales",
        "f__Chroococcidiopsidaceae",
        "g__Chroogloeocystis",
        "s__Chroogloeocystis sp002939305",
        "Bacteria",
        "Cyanobacteriota",
        "Cyanobacteriia",
        "Cyanobacteriales",
        "Chroococcidiopsidaceae",
        "Chroogloeocystis",
        "Chroogloeocystis",
        "sp002939305"
    ],
    "_meo": [
        {
            "id": "MEO_0000036",
            "label": "water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}