{ "type": "genome", "identifier": "GCA_937129245.1", "organism": "uncultured Parvularculaceae bacterium", "title": "uncultured Parvularculaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937129245.1", "bioproject": "PRJEB51071", "biosample": "SAMEA13959118", "wgs_master": "CAKZMV000000000.1", "refseq_category": "na", "taxid": "622613", "species_taxid": "622613", "organism_name": "uncultured Parvularculaceae bacterium", "infraspecific_name": "", "isolate": "ERR2094170_bin.26_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/10", "asm_name": "ERR2094170_bin.26_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/129/245/GCA_937129245.1_ERR2094170_bin.26_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-10", "dateModified": "2023-01-10", "datePublished": "2023-01-10", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Parvularculaceae bacterium" ], "sample_taxid": [ "622613" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.820 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 73.46, "contamination": 6.25, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2901787", "Number of Sequences": "734", "Longest Sequences (bp)": "16296", "N50 (bp)": "4603", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "62.9", "Number of CDSs": "2284", "Average Protein Length": "267.4", "Coding Ratio (%)": "63.1", "Number of rRNAs": "1", "Number of tRNAs": "40", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=CGMCC 1.12710", "accession": "GCA_900199215.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 77.7914, "matched_fragments": 220, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=DSM 105738", "accession": "GCA_014199495.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 77.7667, "matched_fragments": 220, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicaulis flavus", "strain": "strain=SY-3-19", "accession": "GCA_002943565.1", "taxid": 2058213, "species_taxid": 2058213, "relation_to_type": "type", "validated": true, "ani": 77.6326, "matched_fragments": 179, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_022559625.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.371, "matched_fragments": 75, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula oceani", "strain": "strain=JLT2013", "accession": "GCA_000733125.1", "taxid": 1247963, "species_taxid": 1247963, "relation_to_type": "type", "validated": true, "ani": 75.7699, "matched_fragments": 79, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantimonas endophytica", "strain": "strain=KCTC 52296", "accession": "GCA_024105745.1", "taxid": 1522175, "species_taxid": 1522175, "relation_to_type": "type", "validated": true, "ani": 75.7676, "matched_fragments": 69, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia granuli", "strain": "strain=Ko04", "accession": "GCA_000380505.1", "taxid": 363259, "species_taxid": 363259, "relation_to_type": "type", "validated": true, "ani": 75.7468, "matched_fragments": 55, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus mangrovi", "strain": "strain=B2012", "accession": "GCA_016411865.1", "taxid": 2796142, "species_taxid": 2796142, "relation_to_type": "type", "validated": true, "ani": 75.7158, "matched_fragments": 61, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus kandeliae", "strain": "strain=J103", "accession": "GCA_003073115.1", "taxid": 2073160, "species_taxid": 2073160, "relation_to_type": "type", "validated": true, "ani": 75.569, "matched_fragments": 69, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus sediminis", "strain": "strain=PTG4-2", "accession": "GCA_003258595.1", "taxid": 2184697, "species_taxid": 2184697, "relation_to_type": "type", "validated": true, "ani": 75.5153, "matched_fragments": 66, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium symbioticum", "strain": "strain=SB0023/3", "accession": "GCA_902141845.1", "taxid": 2584084, "species_taxid": 2584084, "relation_to_type": "type", "validated": true, "ani": 75.4274, "matched_fragments": 67, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium cosmicum", "strain": "strain=58S1", "accession": "GCA_007290395.1", "taxid": 1404864, "species_taxid": 1404864, "relation_to_type": "type", "validated": true, "ani": 75.4008, "matched_fragments": 64, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Reyranella aquatilis", "strain": "strain=KCTC 52223", "accession": "GCA_020880995.1", "taxid": 2035356, "species_taxid": 2035356, "relation_to_type": "type", "validated": true, "ani": 75.3762, "matched_fragments": 53, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus yangtzensis", "strain": "strain=JL1095", "accession": "GCA_003073145.1", "taxid": 1443441, "species_taxid": 1443441, "relation_to_type": "type", "validated": true, "ani": 75.2393, "matched_fragments": 54, "total_fragments": 590, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus yangtzensis", "strain": "strain=JL1095", "accession": "GCA_001927245.1", "taxid": 1443441, 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