{ "type": "genome", "identifier": "GCA_937138295.1", "organism": "uncultured Campylobacteraceae bacterium", "title": "uncultured Campylobacteraceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937138295.1", "bioproject": "PRJEB51071", "biosample": "SAMEA13959173", "wgs_master": "CAKZOX000000000.1", "refseq_category": "na", "taxid": "197508", "species_taxid": "197508", "organism_name": "uncultured Campylobacteraceae bacterium", "infraspecific_name": "", "isolate": "ERR2094176_bin.93_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/10", "asm_name": "ERR2094176_bin.93_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/138/295/GCA_937138295.1_ERR2094176_bin.93_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-10", "dateModified": "2023-01-10", "datePublished": "2023-01-10", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Campylobacteraceae bacterium" ], "sample_taxid": [ "197508" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.757 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 70.83, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2776224", "Number of Sequences": "222", "Longest Sequences (bp)": "122183", "N50 (bp)": "20692", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "27.9", "Number of CDSs": "2730", "Average Protein Length": "281.8", "Coding Ratio (%)": "83.1", "Number of rRNAs": "1", "Number of tRNAs": "24", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Malaciobacter pacificus", "strain": "strain=LMG 26638", "accession": "GCA_004214795.1", "taxid": 1080223, "species_taxid": 1080223, "relation_to_type": "type", "validated": true, "ani": 80.5192, "matched_fragments": 362, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter pacificus", "strain": "strain=CGMCC 1.11011", "accession": "GCA_014636355.1", "taxid": 1080223, "species_taxid": 1080223, "relation_to_type": "type", "validated": true, "ani": 80.514, "matched_fragments": 361, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter acticola", "strain": "strain=KCTC 52212", "accession": "GCA_013177675.1", "taxid": 1849015, "species_taxid": 1849015, "relation_to_type": "type", "validated": true, "ani": 79.6355, "matched_fragments": 341, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter aquimarinus", "strain": "strain=CECT 8442", "accession": "GCA_004115795.1", "taxid": 1315211, "species_taxid": 1315211, "relation_to_type": "type", "validated": true, "ani": 79.4936, "matched_fragments": 323, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter aquimarinus", "strain": "strain=W63", "accession": "GCA_013177635.1", "taxid": 1315211, "species_taxid": 1315211, "relation_to_type": "type", "validated": true, "ani": 79.434, "matched_fragments": 329, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Poseidonibacter lekithochrous", "strain": "strain=DSM 100870", "accession": "GCA_013283835.1", "taxid": 1904463, "species_taxid": 1904463, "relation_to_type": "type", "validated": true, "ani": 79.3515, "matched_fragments": 330, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Halarcobacter] arenosus", "strain": "strain=CAU 1517", "accession": "GCA_005771535.1", "taxid": 2576037, "species_taxid": 2576037, "relation_to_type": "type", "validated": true, "ani": 79.2855, "matched_fragments": 309, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Poseidonibacter lekithochrous", "strain": "strain=LFT 1.7", "accession": "GCA_001878855.1", "taxid": 1904463, "species_taxid": 1904463, "relation_to_type": "type", "validated": true, "ani": 79.2696, "matched_fragments": 319, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=CECT 7835", "accession": "GCA_004116675.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 79.1862, "matched_fragments": 286, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter butzleri", "strain": "strain=NCTC 12481", "accession": "GCA_900187115.1", "taxid": 28197, "species_taxid": 28197, "relation_to_type": "type", "validated": true, "ani": 79.1677, "matched_fragments": 268, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter butzleri", "strain": "strain=RM4018", "accession": "GCA_000014025.1", "taxid": 28197, "species_taxid": 28197, "relation_to_type": "type", "validated": true, "ani": 79.1606, "matched_fragments": 269, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter suis", "strain": "strain=CECT7833", "accession": "GCA_004023465.1", "taxid": 1278212, "species_taxid": 1278212, "relation_to_type": "type", "validated": true, "ani": 79.1537, "matched_fragments": 322, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=LMG 26154", "accession": "GCA_003346815.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 79.1114, "matched_fragments": 293, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter butzleri", "strain": "strain=LMG 10828", "accession": "GCA_024584145.1", "taxid": 28197, "species_taxid": 28197, "relation_to_type": "type", "validated": true, "ani": 79.0688, "matched_fragments": 275, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=LMG 26156", "accession": "GCA_013201665.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 78.9916, "matched_fragments": 345, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=CECT7836", "accession": "GCA_004023405.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 78.967, "matched_fragments": 338, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter vitoriensis", "strain": "strain=LMG 30050", "accession": "GCA_024583985.1", "taxid": 2011099, "species_taxid": 2011099, "relation_to_type": "type", "validated": true, "ani": 77.7611, "matched_fragments": 237, "total_fragments": 819, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter vitoriensis", "strain": "strain=CECT 9230", "accession": "GCA_003316695.1", "taxid": 2011099, 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