{
    "type": "genome",
    "identifier": "GCA_937862545.1",
    "organism": "uncultured Microbacterium sp.",
    "title": "uncultured Microbacterium sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937862545.1",
        "bioproject": "PRJEB51080",
        "biosample": "SAMEA14036485",
        "wgs_master": "CALMCR000000000.1",
        "refseq_category": "na",
        "taxid": "191216",
        "species_taxid": "191216",
        "organism_name": "uncultured Microbacterium sp.",
        "infraspecific_name": "",
        "isolate": "ERR3519527_bin.43_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/11",
        "asm_name": "ERR3519527_bin.43_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/862/545/GCA_937862545.1_ERR3519527_bin.43_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-11",
    "dateModified": "2023-01-11",
    "datePublished": "2023-01-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Microbacterium sp."
        ],
        "sample_taxid": [
            "191216"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.919 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 85.42,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3372363",
        "Number of Sequences": "276",
        "Longest Sequences (bp)": "68603",
        "N50 (bp)": "21102",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.8",
        "Number of CDSs": "3039",
        "Average Protein Length": "319.6",
        "Coding Ratio (%)": "86.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_014648755.1",
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                "species_taxid": 33918,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.1251,
                "matched_fragments": 796,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Microbacterium liquefaciens",
                "strain": "strain=NBRC 15037",
                "accession": "GCA_006539765.1",
                "taxid": 33918,
                "species_taxid": 33918,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.102,
                "matched_fragments": 792,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Microbacterium oxydans",
                "strain": "strain=NBRC 15586",
                "accession": "GCA_006540085.1",
                "taxid": 82380,
                "species_taxid": 82380,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 87.6519,
                "matched_fragments": 839,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium oxydans",
                "strain": "strain=DSM 20578",
                "accession": "GCA_008868025.1",
                "taxid": 82380,
                "species_taxid": 82380,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 87.6354,
                "matched_fragments": 841,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium algeriense",
                "strain": "strain=G1",
                "accession": "GCA_008868005.1",
                "taxid": 2615184,
                "species_taxid": 2615184,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.5563,
                "matched_fragments": 764,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium foliorum",
                "strain": "strain=NRRL B-24224",
                "accession": "GCA_003367705.1",
                "taxid": 104336,
                "species_taxid": 104336,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 82.8956,
                "matched_fragments": 646,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium bovistercoris",
                "strain": "strain=NEAU-LLE",
                "accession": "GCA_003387575.1",
                "taxid": 2293570,
                "species_taxid": 2293570,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0197,
                "matched_fragments": 512,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium commune",
                "strain": "strain=Re1",
                "accession": "GCA_014836945.1",
                "taxid": 2762219,
                "species_taxid": 2762219,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.8806,
                "matched_fragments": 484,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium oryzae",
                "strain": "strain=MB-10",
                "accession": "GCA_009735645.1",
                "taxid": 743009,
                "species_taxid": 743009,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.4108,
                "matched_fragments": 345,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium yannicii",
                "strain": "strain=DSM 23203",
                "accession": "GCA_024055635.1",
                "taxid": 671622,
                "species_taxid": 671622,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1645,
                "matched_fragments": 418,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbacterium invictum",
                "strain": "strain=DSM 19600",
                "accession": "GCA_023155715.1",
                "taxid": 515415,
                "species_taxid": 515415,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1267,
                "matched_fragments": 383,
                "total_fragments": 983,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 85.42,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_008868125.1",
                "gtdb_species": "s__Microbacterium maritypicum",
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                "matched_fragments": 934,
                "total_fragments": 983,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.89",
                "min_intra_species_ani": "96.90",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 8,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000455825.1",
                "gtdb_species": "s__Microbacterium maritypicum_A",
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                "matched_fragments": 841,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.67",
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                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_000425985.1",
                "gtdb_species": "s__Microbacterium sp000425985",
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                "matched_fragments": 833,
                "total_fragments": 983,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.44",
                "min_intra_species_ani": "96.40",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_002979475.1",
                "gtdb_species": "s__Microbacterium sp002979475",
                "ani": 87.94,
                "matched_fragments": 800,
                "total_fragments": 983,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006540085.1",
                "gtdb_species": "s__Microbacterium oxydans",
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                "matched_fragments": 839,
                "total_fragments": 983,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.85",
                "min_intra_species_ani": "98.27",
                "mean_intra_species_af": "0.91",
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                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCF_000956405.1",
                "gtdb_species": "s__Microbacterium oxydans_C",
                "ani": 87.3569,
                "matched_fragments": 763,
                "total_fragments": 983,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002979435.1",
                "gtdb_species": "s__Microbacterium sp002979435",
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                "matched_fragments": 778,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_004794515.1",
                "gtdb_species": "s__Microbacterium sp004794515",
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                "mean_intra_species_ani": "99.99",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_002979655.1",
                "gtdb_species": "s__Microbacterium sp002979655",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
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                "mean_intra_species_ani": "97.69",
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            {
                "accession": "GCF_900095745.1",
                "gtdb_species": "s__Microbacterium oxydans_B",
                "ani": 86.4812,
                "matched_fragments": 753,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium",
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                "mean_intra_species_ani": "98.33",
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                "num_clustered_genomes": 3,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.344,
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    "_gtdb_taxon": [
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        "p__Actinomycetota",
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    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Microbacterium",
        "s__Microbacterium maritypicum",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Microbacteriaceae",
        "Microbacterium",
        "Microbacterium",
        "maritypicum"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}