<?xml version="1.0" ?>
<BioSampleSet><BioSample access="public" publication_date="2023-01-03T00:00:00.000" last_update="2023-04-12T11:34:14.000" submission_date="2023-01-04T08:29:08.213" id="32556614" accession="SAMEA14074698">   <Ids>     <Id db="BioSample" is_primary="1">SAMEA14074698</Id>     <Id db="SRA">ERS11677928</Id>   </Ids>   <Description>     <Title>Metagenome-assembled genome: ERR2206751_bin.136_CONCOCT_v1.1_MAG</Title>     <Organism taxonomy_id="165436" taxonomy_name="uncultured Flavobacteriaceae bacterium">       <OrganismName>uncultured Flavobacteriaceae bacterium</OrganismName>     </Organism>     <Comment>       <Paragraph>This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR2206751 of study ERP104730.</Paragraph>     </Comment>   </Description>   <Owner>     <Name>EBI</Name>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="ENA-CHECKLIST">ERC000047</Attribute>     <Attribute attribute_name="ENA-FIRST-PUBLIC">2023-01-03</Attribute>     <Attribute attribute_name="ENA-LAST-UPDATE">2023-01-03</Attribute>     <Attribute attribute_name="External Id">SAMEA14074698</Attribute>     <Attribute attribute_name="INSDC center alias">EBI</Attribute>     <Attribute attribute_name="INSDC center name">European Bioinformatics Institute</Attribute>     <Attribute attribute_name="INSDC first public">2023-01-03T00:32:40Z</Attribute>     <Attribute attribute_name="INSDC last update">2023-01-03T00:32:40Z</Attribute>     <Attribute attribute_name="INSDC status">public</Attribute>     <Attribute attribute_name="Submitter Id">ERR2206751_bin.136_CONCOCT_v1.1_MAG</Attribute>     <Attribute attribute_name="assembly quality">Many fragments with little to no review of assembly other than reporting of standard assembly statistics</Attribute>     <Attribute attribute_name="assembly software">Megahit</Attribute>     <Attribute attribute_name="binning parameters">Default</Attribute>     <Attribute attribute_name="binning software">CONCOCT v1.1</Attribute>     <Attribute attribute_name="broker name">EMG broker account, EMBL-EBI</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">2014-06-05</Attribute>     <Attribute attribute_name="completeness score">82.72</Attribute>     <Attribute attribute_name="completeness software">CheckM</Attribute>     <Attribute attribute_name="contamination score">3.68</Attribute>     <Attribute attribute_name="environment (biome)" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">Environmental</Attribute>     <Attribute attribute_name="environment (feature)" harmonized_name="env_local_scale" display_name="local-scale environmental context">Aquatic</Attribute>     <Attribute attribute_name="environment (material)" harmonized_name="env_medium" display_name="environmental medium">Marine</Attribute>     <Attribute attribute_name="geographic location (country and/or sea)" harmonized_name="geo_loc_name" display_name="geographic location">Baltic Sea</Attribute>     <Attribute attribute_name="geographic location (latitude)">58.1323</Attribute>     <Attribute attribute_name="geographic location (longitude)">10.0</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">metagenome-assembled genome</Attribute>     <Attribute attribute_name="isolation_source" harmonized_name="isolation_source" display_name="isolation source">marine metagenome</Attribute>     <Attribute attribute_name="metagenomic source">marine metagenome</Attribute>     <Attribute attribute_name="project name" harmonized_name="project_name" display_name="project name">Two out of three datasets (the first one already published with Hugerth et al 2015) included in the Baltic Sea reference metagenome assembly. The assembly include herein is a coassembly of all three datasets, complete with annotated genes to facilitate further studies of the Baltic Sea with much less computational effort. The assembly is constructed using 2.6 billion metagenomic reads from 81 water samples, spanning both spatial and temporal dimensions, and contains 6.8 million genes that have been annotated for function and taxonomy. The assembly is useful as a reference, facilitating taxonomic and functional annotation of additional samples by simply mapping their reads against the assembly.</Attribute>     <Attribute attribute_name="sample derived from">SAMEA104408592</Attribute>     <Attribute attribute_name="sample name" harmonized_name="sample_name" display_name="sample name">ERR2206751_bin.136_CONCOCT_v1.1_MAG</Attribute>     <Attribute attribute_name="scientific_name">uncultured Flavobacteriaceae bacterium</Attribute>     <Attribute attribute_name="sequencing method">Illumina HiSeq 2500</Attribute>     <Attribute attribute_name="taxonomic identity marker">multi-marker approach</Attribute>   </Attributes>   <Status status="live" when="2023-01-05T08:27:20.227"/> </BioSample> </BioSampleSet>
