{
    "type": "genome",
    "identifier": "GCA_937889875.1",
    "organism": "uncultured Firmicutes bacterium",
    "title": "uncultured Firmicutes bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937889875.1",
        "bioproject": "PRJEB51895",
        "biosample": "SAMEA14081060",
        "wgs_master": "CALBYW000000000.1",
        "refseq_category": "na",
        "taxid": "344338",
        "species_taxid": "344338",
        "organism_name": "uncultured Firmicutes bacterium",
        "infraspecific_name": "",
        "isolate": "SRR5275480_bin.52_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/09",
        "asm_name": "SRR5275480_bin.52_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/889/875/GCA_937889875.1_SRR5275480_bin.52_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-09",
    "dateModified": "2023-01-09",
    "datePublished": "2023-01-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Firmicutes bacterium"
        ],
        "sample_taxid": [
            "344338"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.456 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 97.45,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1606119",
        "Number of Sequences": "48",
        "Longest Sequences (bp)": "180077",
        "N50 (bp)": "66555",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.4",
        "Number of CDSs": "1555",
        "Average Protein Length": "314.7",
        "Coding Ratio (%)": "91.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_000156655.1",
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                "relation_to_type": "suspected-type",
                "validated": true,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Absicoccus porci",
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                "accession": "GCA_003725415.1",
                "taxid": 2486576,
                "species_taxid": 2486576,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Holdemanella porci",
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                "accession": "GCA_009696075.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalicoccus pleomorphus",
                "strain": "strain=NCTC11087",
                "accession": "GCA_900459315.1",
                "taxid": 1323,
                "species_taxid": 1323,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1412,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalicoccus pleomorphus",
                "strain": "strain=DSM 20574",
                "accession": "GCA_000420345.1",
                "taxid": 1323,
                "species_taxid": 1323,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0932,
                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalitalea cylindroides",
                "strain": "strain=ATCC 27803",
                "accession": "GCA_000469305.1",
                "taxid": 39483,
                "species_taxid": 39483,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7123,
                "matched_fragments": 67,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_003480165.1",
                "gtdb_species": "s__Absicoccus sp000434355",
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                "matched_fragments": 495,
                "total_fragments": 512,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Absicoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.44",
                "min_intra_species_ani": "99.16",
                "mean_intra_species_af": "0.95",
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                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000156655.1",
                "gtdb_species": "s__Holdemanella biformis",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 17,
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            },
            {
                "accession": "GCF_003725415.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Absicoccus",
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                "mean_intra_species_ani": "98.56",
                "min_intra_species_ani": "98.14",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 14,
                "status": "-"
            },
            {
                "accession": "GCA_900547815.1",
                "gtdb_species": "s__Holdemanella sp900547815",
                "ani": 78.276,
                "matched_fragments": 103,
                "total_fragments": 512,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.44",
                "min_intra_species_ani": "96.94",
                "mean_intra_species_af": "0.79",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003436425.1",
                "gtdb_species": "s__Holdemanella sp003436425",
                "ani": 78.1249,
                "matched_fragments": 110,
                "total_fragments": 512,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
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                "mean_intra_species_ani": "98.46",
                "min_intra_species_ani": "97.77",
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            },
            {
                "accession": "GCF_003458715.1",
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                "total_fragments": 512,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
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                "num_clustered_genomes": 7,
                "status": "-"
            },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
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                "num_clustered_genomes": 21,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella",
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                "mean_intra_species_ani": "96.25",
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                "status": "-"
            },
            {
                "accession": "GCA_902797585.1",
                "gtdb_species": "s__RUG14284 sp902797585",
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                "matched_fragments": 65,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__RUG14284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000469305.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalitalea",
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                "mean_intra_species_ani": "98.51",
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                "num_clustered_genomes": 12,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Absicoccus",
        "s__Absicoccus sp000434355"
    ],
    "_genome_taxon": [
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        "Firmicutes",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Erysipelotrichales",
        "f__Erysipelotrichaceae",
        "g__Absicoccus",
        "s__Absicoccus sp000434355",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "Erysipelotrichales",
        "Erysipelotrichaceae",
        "Absicoccus",
        "Absicoccus",
        "sp000434355"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}