{ "type": "genome", "identifier": "GCA_937895145.1", "organism": "uncultured Methanosarcina sp.", "title": "uncultured Methanosarcina sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937895145.1", "bioproject": "PRJEB51073", "biosample": "SAMEA14037465", "wgs_master": "CALAYF000000000.1", "refseq_category": "na", "taxid": "176307", "species_taxid": "176307", "organism_name": "uncultured Methanosarcina sp.", "infraspecific_name": "", "isolate": "SRR1562006_bin.11_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/11", "asm_name": "SRR1562006_bin.11_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/895/145/GCA_937895145.1_SRR1562006_bin.11_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-11", "dateModified": "2023-01-11", "datePublished": "2023-01-11", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Methanosarcina sp." ], "sample_taxid": [ "176307" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.927 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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900, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanosarcina barkeri", "strain": "strain=MS", "accession": "GCA_000970025.1", "taxid": 2208, "species_taxid": 2208, "relation_to_type": "type", "validated": true, "ani": 82.2649, "matched_fragments": 661, "total_fragments": 900, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanosarcina barkeri", "strain": "strain=JCM 10043", "accession": "GCA_001316305.1", "taxid": 2208, "species_taxid": 2208, "relation_to_type": "type", "validated": true, "ani": 82.1849, "matched_fragments": 634, "total_fragments": 900, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanosarcina spelaei", "strain": "strain=MC-15", "accession": "GCA_002287235.1", "taxid": 1036679, "species_taxid": 1036679, "relation_to_type": "type", "validated": true, "ani": 81.9239, "matched_fragments": 628, "total_fragments": 900, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanosarcina thermophila", "strain": "strain=TM-1", "accession": "GCA_000969885.1", "taxid": 2210, "species_taxid": 2210, "relation_to_type": "type", "validated": true, "ani": 81.557, "matched_fragments": 570, "total_fragments": 900, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002509325.1", "gtdb_species": "s__Methanosarcina sp002509325", "ani": 99.4919, "matched_fragments": 739, "total_fragments": 900, "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.58", "min_intra_species_ani": "99.58", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_002499445.1", "gtdb_species": "s__Methanosarcina sp002499445", "ani": 89.5888, 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