{
    "type": "genome",
    "identifier": "GCA_937895865.1",
    "organism": "uncultured Ruminococcus sp.",
    "title": "uncultured Ruminococcus sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937895865.1",
        "bioproject": "PRJEB50943",
        "biosample": "SAMEA14076124",
        "wgs_master": "CALBKS000000000.1",
        "refseq_category": "na",
        "taxid": "165186",
        "species_taxid": "165186",
        "organism_name": "uncultured Ruminococcus sp.",
        "infraspecific_name": "",
        "isolate": "SRR6425825_bin.9_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/10",
        "asm_name": "SRR6425825_bin.9_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/895/865/GCA_937895865.1_SRR6425825_bin.9_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-10",
    "dateModified": "2023-01-10",
    "datePublished": "2023-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Ruminococcus sp."
        ],
        "sample_taxid": [
            "165186"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.721 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 93.83,
        "contamination": 8.33,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2531351",
        "Number of Sequences": "187",
        "Longest Sequences (bp)": "87140",
        "N50 (bp)": "20412",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.3",
        "Number of CDSs": "2210",
        "Average Protein Length": "315.8",
        "Coding Ratio (%)": "82.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Ruminococcus flavefaciens",
                "strain": "strain=ATCC 19208",
                "accession": "GCA_000518765.1",
                "taxid": 1265,
                "species_taxid": 1265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.398,
                "matched_fragments": 181,
                "total_fragments": 742,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 93.83,
            "contamination": 8.33,
            "strain_heterogeneity": 50.0
        },
        "gtdb_result": [
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                "accession": "GCA_015066935.1",
                "gtdb_species": "s__Ruminococcus sp015066935",
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                "total_fragments": 742,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.82",
                "min_intra_species_ani": "96.93",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017461395.1",
                "gtdb_species": "s__Ruminococcus sp017461395",
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                "matched_fragments": 194,
                "total_fragments": 742,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017513795.1",
                "gtdb_species": "s__Ruminococcus sp017513795",
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                "matched_fragments": 231,
                "total_fragments": 742,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.92",
                "min_intra_species_ani": "97.92",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017516465.1",
                "gtdb_species": "s__Ruminococcus sp017516465",
                "ani": 79.5762,
                "matched_fragments": 209,
                "total_fragments": 742,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017935095.1",
                "gtdb_species": "s__Ruminococcus sp017935095",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
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                "mean_intra_species_ani": "96.87",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_017517145.1",
                "gtdb_species": "s__Ruminococcus sp017517145",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus",
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                "mean_intra_species_ani": "N/A",
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            },
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            },
            {
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            },
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                "gtdb_species": "s__Ruminococcus sp015066955",
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            {
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                "accession": "GCA_017525915.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Ruminococcaceae",
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        "s__Ruminococcus sp015066935",
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        "A",
        "Clostridia",
        "Oscillospirales",
        "Ruminococcaceae",
        "Ruminococcus",
        "Ruminococcus",
        "sp015066935"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}