{ "type": "genome", "identifier": "GCA_937898355.1", "organism": "Corynebacterium bovis", "title": "Corynebacterium bovis", "description": "derived from metagenome; fragmented assembly; genome length too small", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937898355.1", "bioproject": "PRJEB51072", "biosample": "SAMEA14081593", "wgs_master": "CALDKT000000000.1", "refseq_category": "na", "taxid": "36808", "species_taxid": "36808", "organism_name": "Corynebacterium bovis", "infraspecific_name": "", "isolate": "ERR1332588_bin.19_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/09", "asm_name": "ERR1332588_bin.19_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/898/355/GCA_937898355.1_ERR1332588_bin.19_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from metagenome; fragmented assembly; genome length too small", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-09", "dateModified": "2023-01-09", "datePublished": "2023-01-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium bovis" ], "sample_taxid": [ "36808" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "0.464 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 82.87, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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"Corynebacterium variabile", "strain": "strain=NBRC 15286", "accession": "GCA_006539825.1", "taxid": 1727, "species_taxid": 1727, "relation_to_type": "type", "validated": true, "ani": 80.1746, "matched_fragments": 118, "total_fragments": 177, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 82.87, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000183325.1", "gtdb_species": "s__Corynebacterium bovis", "ani": 98.4056, "matched_fragments": 168, "total_fragments": 177, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.01", "min_intra_species_ani": "98.42", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.83", "num_clustered_genomes": 23, "status": "conclusive" }, { "accession": "GCF_007970465.1", "gtdb_species": "s__Corynebacterium nuruki", "ani": 81.3752, 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