{ "type": "genome", "identifier": "GCA_937901205.1", "organism": "uncultured Flavobacteriaceae bacterium", "title": "uncultured Flavobacteriaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937901205.1", "bioproject": "PRJEB51078", "biosample": "SAMEA14074996", "wgs_master": "CALCHO000000000.1", "refseq_category": "na", "taxid": "165436", "species_taxid": "165436", "organism_name": "uncultured Flavobacteriaceae bacterium", "infraspecific_name": "", "isolate": "ERR598960_bin.1_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/10", "asm_name": "ERR598960_bin.1_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/901/205/GCA_937901205.1_ERR598960_bin.1_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-10", "dateModified": "2023-01-10", "datePublished": "2023-01-10", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Flavobacteriaceae bacterium" ], "sample_taxid": [ "165436" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "0.735 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 63.19, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 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"status": "below_threshold" }, { "organism_name": "Marixanthomonas ophiurae", "strain": "strain=KMM 3046", "accession": "GCA_003413745.1", "taxid": 387659, "species_taxid": 387659, "relation_to_type": "type", "validated": true, "ani": 76.2672, "matched_fragments": 68, "total_fragments": 633, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marixanthomonas spongiae", "strain": "strain=HN-E44", "accession": "GCA_003095375.1", "taxid": 2174845, "species_taxid": 2174845, "relation_to_type": "type", "validated": true, "ani": 76.1597, "matched_fragments": 75, "total_fragments": 633, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aequorivita sinensis", "strain": "strain=S1-10", "accession": "GCA_006346335.1", "taxid": 1382458, "species_taxid": 1382458, "relation_to_type": "type", "validated": true, "ani": 76.0224, "matched_fragments": 53, "total_fragments": 633, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 63.19, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002707025.1", "gtdb_species": "s__IN17 sp002707025", "ani": 99.8913, "matched_fragments": 629, "total_fragments": 633, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__IN17", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.83", "min_intra_species_ani": "99.78", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCA_002694465.1", "gtdb_species": "s__IN17 sp002694465", "ani": 77.2967, "matched_fragments": 169, "total_fragments": 633, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__IN17", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.93", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, 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