{
    "type": "genome",
    "identifier": "GCA_937967255.1",
    "organism": "uncultured Sphingobacteriia bacterium",
    "title": "uncultured Sphingobacteriia bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937967255.1",
        "bioproject": "PRJEB51072",
        "biosample": "SAMEA14082420",
        "wgs_master": "CALBSM000000000.1",
        "refseq_category": "na",
        "taxid": "246143",
        "species_taxid": "246143",
        "organism_name": "uncultured Sphingobacteriia bacterium",
        "infraspecific_name": "",
        "isolate": "SRR6231210_bin.11_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/11",
        "asm_name": "SRR6231210_bin.11_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/967/255/GCA_937967255.1_SRR6231210_bin.11_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-11",
    "dateModified": "2023-01-11",
    "datePublished": "2023-01-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Sphingobacteriia bacterium"
        ],
        "sample_taxid": [
            "246143"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.887 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
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        "contamination": 6.25,
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        "genome_count": 1
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    "data_type": "MAG",
    "data_source": "INSDC",
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        "Longest Sequences (bp)": "122253",
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        "Gap Ratio (%)": "0.000000",
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        "Number of CDSs": "2617",
        "Average Protein Length": "334.3",
        "Coding Ratio (%)": "84.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
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    "has_analysis": true,
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                "organism_name": "Sediminibacterium goheungense",
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                "organism_name": "Hydrotalea flava",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea lipotrueae",
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                "ani_threshold": 95,
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                "organism_name": "Lacibacter cauensis",
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        "bacillus_cell_shape": null,
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        "sp017996795"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}