{ "type": "genome", "identifier": "GCA_937981905.1", "organism": "uncultured Enterobacterales bacterium", "title": "uncultured Enterobacterales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "marine college, shandong university", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937981905.1", "bioproject": "PRJEB50838", "biosample": "SAMEA14072945", "wgs_master": "CALJMY000000000.1", "refseq_category": "na", "taxid": "194846", "species_taxid": "194846", "organism_name": "uncultured Enterobacterales bacterium", "infraspecific_name": "", "isolate": "B3_Bin_Bin_27_1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/27", "asm_name": "B3_Bin_Bin_27_1", "submitter": "marine college, shandong university", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/981/905/GCA_937981905.1_B3_Bin_Bin_27_1", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-27", "dateModified": "2023-01-27", "datePublished": "2023-01-27", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Enterobacterales bacterium" ], "sample_taxid": [ "194846" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "0.879 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 93.98, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3095643", "Number of Sequences": "255", "Longest Sequences (bp)": "54668", "N50 (bp)": "18023", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "35.7", "Number of CDSs": "2573", "Average Protein Length": "317.5", "Coding Ratio (%)": "79.2", "Number of rRNAs": "0", "Number of tRNAs": "56", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Colwellia echini", "strain": "strain=A3", "accession": "GCA_002843355.2", "taxid": 1982103, "species_taxid": 1982103, "relation_to_type": "type", "validated": true, "ani": 76.666, "matched_fragments": 70, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Colwellia demingiae", "strain": "strain=ACAM 459", "accession": "GCA_007954275.1", "taxid": 89401, "species_taxid": 89401, "relation_to_type": "type", "validated": true, "ani": 76.6281, "matched_fragments": 61, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tetraodonis", "strain": "strain=GFC", "accession": "GCA_002310835.1", "taxid": 43659, "species_taxid": 43659, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4175, "matched_fragments": 56, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tetraodonis", "strain": "strain=NBRC 103034", "accession": "GCA_007991235.1", "taxid": 43659, "species_taxid": 43659, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4028, "matched_fragments": 52, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas aliena", "strain": "strain=SW19", "accession": "GCA_014905615.1", "taxid": 247523, "species_taxid": 247523, "relation_to_type": "type", "validated": true, "ani": 76.3942, "matched_fragments": 60, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas neustonica", "strain": "strain=PAMC 28425", "accession": "GCA_001653135.1", "taxid": 1840331, "species_taxid": 1840331, "relation_to_type": "type", "validated": true, "ani": 76.3544, "matched_fragments": 61, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella electrodiphila", "strain": "strain=DSM 24955", "accession": "GCA_023283985.1", "taxid": 934143, "species_taxid": 934143, "relation_to_type": "type", "validated": true, "ani": 76.2118, "matched_fragments": 62, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas undina", "strain": "strain=DSM 6065", "accession": "GCA_000238275.4", "taxid": 43660, "species_taxid": 43660, "relation_to_type": "type", "validated": true, "ani": 76.1981, "matched_fragments": 51, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas shioyasakiensis", "strain": "strain=JCM 18891", "accession": "GCA_001550135.1", "taxid": 1190813, "species_taxid": 1190813, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1492, "matched_fragments": 53, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_000153245.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 75.9505, "matched_fragments": 56, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_002310815.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 75.9184, "matched_fragments": 56, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_003568825.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 75.8948, "matched_fragments": 57, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Photobacterium iliopiscarium", "strain": "strain=ATCC 51760", "accession": "GCA_000950265.1", "taxid": 56192, "species_taxid": 56192, "relation_to_type": "type", "validated": true, "ani": 75.7667, "matched_fragments": 52, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Photobacterium iliopiscarium", "strain": "strain=ATCC 51760", "accession": "GCA_003026395.1", "taxid": 56192, "species_taxid": 56192, "relation_to_type": "type", "validated": true, "ani": 75.7441, "matched_fragments": 53, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas arabiensis", "strain": "strain=JCM 17292", "accession": "GCA_001550155.1", "taxid": 874454, "species_taxid": 874454, "relation_to_type": "type", "validated": true, "ani": 75.7232, "matched_fragments": 56, "total_fragments": 896, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 93.98, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_001874365.1", "gtdb_species": "s__Psychrobium sp001874365", "ani": 78.8592, "matched_fragments": 206, "total_fragments": 896, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Psychrobiaceae;g__Psychrobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002835545.1", "gtdb_species": "s__Psychrobium sp002835545", "ani": 78.5944, "matched_fragments": 164, "total_fragments": 896, "gtdb_taxonomy": 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