{ "type": "genome", "identifier": "GCA_937982495.1", "organism": "uncultured Desulfuromonas sp.", "title": "uncultured Desulfuromonas sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_937982495.1", "bioproject": "PRJEB51072", "biosample": "SAMEA14082241", "wgs_master": "CALJLX000000000.1", "refseq_category": "na", "taxid": "181013", "species_taxid": "181013", "organism_name": "uncultured Desulfuromonas sp.", "infraspecific_name": "", "isolate": "SRR6007446_bin.72_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/11", "asm_name": "SRR6007446_bin.72_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/982/495/GCA_937982495.1_SRR6007446_bin.72_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-11", "dateModified": "2023-01-11", "datePublished": "2023-01-11", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Desulfuromonas sp." ], "sample_taxid": [ "181013" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "0.938 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 4.63, "strain_heterogeneity": 50.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3321809", "Number of Sequences": "677", "Longest Sequences (bp)": "34735", "N50 (bp)": "6746", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "62.0", "Number of CDSs": "2553", "Average Protein Length": "299.8", "Coding Ratio (%)": "69.1", "Number of rRNAs": "0", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfuromonas acetexigens", "strain": "strain=2873", "accession": "GCA_007051125.1", "taxid": 38815, "species_taxid": 38815, "relation_to_type": "type", "validated": true, "ani": 90.6737, "matched_fragments": 660, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfuromonas acetexigens", "strain": "", "accession": "GCA_900111775.1", "taxid": 38815, "species_taxid": 38815, "relation_to_type": "type", "validated": true, "ani": 90.6711, "matched_fragments": 661, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfuromonas versatilis", "strain": "strain=NIT-T3", "accession": "GCA_019704135.1", "taxid": 2802975, "species_taxid": 2802975, "relation_to_type": "type", "validated": true, "ani": 78.8121, "matched_fragments": 292, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfuromonas soudanensis", "strain": "strain=WTL", "accession": "GCA_001278055.1", "taxid": 1603606, "species_taxid": 1603606, "relation_to_type": "type", "validated": true, "ani": 78.4506, "matched_fragments": 248, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geoalkalibacter halelectricus", "strain": "strain=SAP-1", "accession": "GCA_025263685.1", "taxid": 2847045, "species_taxid": 2847045, "relation_to_type": "type", "validated": true, "ani": 77.9091, "matched_fragments": 179, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geothermobacter ehrlichii", "strain": "strain=SS015", "accession": "GCA_008124615.1", "taxid": 213224, "species_taxid": 213224, "relation_to_type": "type", "validated": true, "ani": 77.8705, "matched_fragments": 175, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geobacter grbiciae", "strain": "strain=DSM 13689", "accession": "GCA_018531165.1", "taxid": 155042, "species_taxid": 155042, "relation_to_type": "type", "validated": true, "ani": 77.0379, "matched_fragments": 84, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geobacter metallireducens", "strain": "strain=GS-15", "accession": "GCA_000012925.1", "taxid": 28232, "species_taxid": 28232, "relation_to_type": "type", "validated": true, "ani": 76.9899, "matched_fragments": 81, "total_fragments": 743, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Syntrophotalea carbinolica", "strain": 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