{
    "type": "genome",
    "identifier": "GCA_937991665.1",
    "organism": "uncultured Eubacterium sp.",
    "title": "uncultured Eubacterium sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_937991665.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14085316",
        "wgs_master": "CALKPJ000000000.1",
        "refseq_category": "na",
        "taxid": "165185",
        "species_taxid": "165185",
        "organism_name": "uncultured Eubacterium sp.",
        "infraspecific_name": "",
        "isolate": "ERR912095_bin.45_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/10",
        "asm_name": "ERR912095_bin.45_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/991/665/GCA_937991665.1_ERR912095_bin.45_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-10",
    "dateModified": "2023-01-10",
    "datePublished": "2023-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Eubacterium sp."
        ],
        "sample_taxid": [
            "165185"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.644 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.27,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2298501",
        "Number of Sequences": "36",
        "Longest Sequences (bp)": "206252",
        "N50 (bp)": "103767",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.9",
        "Number of CDSs": "2058",
        "Average Protein Length": "329.0",
        "Coding Ratio (%)": "88.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Eubacterium ventriosum",
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                "accession": "GCA_000153885.1",
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                "species_taxid": 39496,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 80.8538,
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                "total_fragments": 746,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eubacterium ventriosum",
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                "accession": "GCA_025150745.1",
                "taxid": 39496,
                "species_taxid": 39496,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 80.5543,
                "matched_fragments": 318,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eubacterium uniforme",
                "strain": "strain=ATCC 35992",
                "accession": "GCA_900167115.1",
                "taxid": 39495,
                "species_taxid": 39495,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4854,
                "matched_fragments": 82,
                "total_fragments": 746,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lachnospira eligens",
                "strain": "strain=ATCC 27750",
                "accession": "GCA_000146185.1",
                "taxid": 39485,
                "species_taxid": 39485,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.4391,
                "matched_fragments": 63,
                "total_fragments": 746,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.27,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900548465.1",
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                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.75",
                "min_intra_species_ani": "97.64",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_003460505.1",
                "gtdb_species": "s__Eubacterium_G sp000435815",
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                "matched_fragments": 327,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.79",
                "min_intra_species_ani": "97.65",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.54",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCF_000153885.1",
                "gtdb_species": "s__Eubacterium_G ventriosum",
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                "matched_fragments": 304,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.27",
                "min_intra_species_ani": "97.67",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.64",
                "num_clustered_genomes": 20,
                "status": "-"
            },
            {
                "accession": "GCA_900550135.1",
                "gtdb_species": "s__Eubacterium_G sp900550135",
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                "matched_fragments": 277,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.87",
                "min_intra_species_ani": "97.32",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900764695.1",
                "gtdb_species": "s__Eubacterium_G sp900764695",
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                "matched_fragments": 223,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003479405.1",
                "gtdb_species": "s__Eubacterium_G sp000432355",
                "ani": 79.885,
                "matched_fragments": 303,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.22",
                "min_intra_species_ani": "97.56",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_910574895.1",
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                "ani": 79.278,
                "matched_fragments": 238,
                "total_fragments": 746,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902363805.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
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                "accession": "GCA_910584795.1",
                "gtdb_species": "s__Eubacterium_G sp910584795",
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                "matched_fragments": 234,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_910578975.1",
                "gtdb_species": "s__Eubacterium_G sp910578975",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eubacterium_G",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_017416465.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__CAG-603",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.325,
        "cell_length": 0.215,
        "doubling_h": null,
        "growth_tmp": 36.972,
        "optimum_tmp": 37.071,
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        "genome_size": 3245697.074,
        "gc_content": 41.131,
        "coding_genes": 3227.555,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 59.583,
        "gram_stain": 0.95,
        "sporulation": 0.0,
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        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "f__Lachnospiraceae",
        "g__Eubacterium_G",
        "s__Eubacterium_G sp900548465"
    ],
    "_genome_taxon": [
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        "sp.",
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        "p__Bacillota_A",
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        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Eubacterium_G",
        "s__Eubacterium_G sp900548465",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
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        "Eubacterium",
        "G",
        "Eubacterium",
        "G",
        "sp900548465"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}