{ "type": "genome", "identifier": "GCA_938005665.1", "organism": "uncultured Myxococcales bacterium", "title": "uncultured Myxococcales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_938005665.1", "bioproject": "PRJEB51072", "biosample": "SAMEA14081883", "wgs_master": "CALLMW000000000.1", "refseq_category": "na", "taxid": "253830", "species_taxid": "253830", "organism_name": "uncultured Myxococcales bacterium", "infraspecific_name": "", "isolate": "SRR3901695_bin.44_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/12", "asm_name": "SRR3901695_bin.44_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/005/665/GCA_938005665.1_SRR3901695_bin.44_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-12", "dateModified": "2023-01-12", "datePublished": "2023-01-12", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Myxococcales bacterium" ], "sample_taxid": [ "253830" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Africa" ], "sample_host_location_id": [], "data_size": "3.233 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "11844330", "Number of Sequences": "324", "Longest Sequences (bp)": "233167", "N50 (bp)": "57378", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "68.4", "Number of CDSs": "9694", "Average Protein Length": "349.2", "Coding Ratio (%)": "85.8", "Number of rRNAs": "0", "Number of tRNAs": "90", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Labilithrix luteola", "strain": "strain=DSM 27648", "accession": "GCA_001263205.1", "taxid": 1391654, "species_taxid": 1391654, "relation_to_type": "type", "validated": true, "ani": 78.6563, "matched_fragments": 1325, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium fumosum", "strain": "strain=DSM 14668", "accession": "GCA_005144585.1", "taxid": 889272, "species_taxid": 889272, "relation_to_type": "neotype", "validated": true, "ani": 75.8537, "matched_fragments": 813, 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}, { "organism_name": "Sandaracinus amylolyticus", "strain": "strain=DSM 53668", "accession": "GCA_000737325.2", "taxid": 927083, "species_taxid": 927083, "relation_to_type": "type", "validated": true, "ani": 75.3803, "matched_fragments": 1062, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas composti", "strain": "strain=DSM 18010", "accession": "GCA_000426365.1", "taxid": 370776, "species_taxid": 370776, "relation_to_type": "type", "validated": true, "ani": 74.9743, "matched_fragments": 208, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteibacter yeojuensis", "strain": "strain=DSM 17673", "accession": "GCA_011742875.1", "taxid": 345309, "species_taxid": 345309, "relation_to_type": "type", "validated": true, "ani": 74.9328, "matched_fragments": 139, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedococcus cremeus", "strain": "strain=CGMCC 1.6963", "accession": "GCA_900111375.1", "taxid": 587636, "species_taxid": 587636, "relation_to_type": "type", "validated": true, "ani": 74.859, "matched_fragments": 208, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Intrasporangium calvum", "strain": "strain=DSM 43043", "accession": "GCA_000184685.1", "taxid": 53358, "species_taxid": 53358, "relation_to_type": "type", "validated": true, "ani": 74.8482, "matched_fragments": 181, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=E264", "accession": "GCA_003568605.1", "taxid": 57975, "species_taxid": 57975, "relation_to_type": "type", "validated": true, "ani": 74.8141, "matched_fragments": 430, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=LMG 19981", "accession": "GCA_006352285.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 74.8028, "matched_fragments": 182, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rathayibacter festucae", "strain": "strain=DSM 15932", "accession": "GCA_004011135.1", "taxid": 110937, "species_taxid": 110937, "relation_to_type": "type", "validated": true, "ani": 74.8014, "matched_fragments": 319, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=E264; ATCC 700388", "accession": "GCA_000012365.1", "taxid": 57975, "species_taxid": 57975, "relation_to_type": "type", "validated": true, "ani": 74.7997, "matched_fragments": 435, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=ATCC 700388", "accession": "GCA_000152285.1", "taxid": 57975, "species_taxid": 57975, "relation_to_type": "type", "validated": true, "ani": 74.7838, "matched_fragments": 418, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus casei", "strain": "strain=LMG 22410", "accession": "GCA_900163565.1", "taxid": 343512, "species_taxid": 343512, "relation_to_type": "type", "validated": true, "ani": 74.779, "matched_fragments": 92, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arsenicicoccus dermatophilus", "strain": "strain=DSM 25571", "accession": "GCA_022568795.1", "taxid": 1076331, "species_taxid": 1076331, "relation_to_type": "type", "validated": true, "ani": 74.7664, "matched_fragments": 153, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbispora siamensis", "strain": "strain=NBRC 104113", "accession": "GCA_016863095.1", "taxid": 564413, "species_taxid": 564413, "relation_to_type": "type", "validated": true, "ani": 74.7538, "matched_fragments": 355, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbispora sitophila", "strain": "strain=NEAU-D428", "accession": "GCA_014892245.1", "taxid": 2771537, "species_taxid": 2771537, "relation_to_type": "type", "validated": true, "ani": 74.7492, "matched_fragments": 337, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microtetraspora malaysiensis", "strain": "strain=NBRC 100735", "accession": "GCA_001528665.1", "taxid": 161358, "species_taxid": 161358, "relation_to_type": "type", "validated": true, "ani": 74.7444, "matched_fragments": 302, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda algicola", "strain": "strain=JCM 31718", "accession": "GCA_004793685.1", "taxid": 2029849, "species_taxid": 2029849, "relation_to_type": "type", "validated": true, "ani": 74.7157, "matched_fragments": 161, 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"status": "below_threshold" }, { "organism_name": "Microbispora rosea subsp. aerata", "strain": "strain=NBRC 14624", "accession": "GCA_016863075.1", "taxid": 147065, "species_taxid": 58117, "relation_to_type": "type", "validated": true, "ani": 74.6674, "matched_fragments": 272, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aichiense", "strain": "strain=JCM 6376", "accession": "GCA_010726245.1", "taxid": 1799, "species_taxid": 1799, "relation_to_type": "type", "validated": true, "ani": 74.6494, "matched_fragments": 124, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium malmesburyense", "strain": "strain=WCM 7299", "accession": "GCA_001050015.1", "taxid": 1566886, "species_taxid": 1566886, "relation_to_type": "type", "validated": true, "ani": 74.6004, "matched_fragments": 154, "total_fragments": 3771, "ani_threshold": 95, "status": "below_threshold" } ], 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