{ "type": "genome", "identifier": "GCA_938009735.1", "organism": "uncultured Flavobacteriaceae bacterium", "title": "uncultured Flavobacteriaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "marine college, shandong university", "publication": [ {} ], "properties": { "assembly_accession": "GCA_938009735.1", "bioproject": "PRJEB50838", "biosample": "SAMEA14072955", "wgs_master": "CALLIG000000000.1", "refseq_category": "na", "taxid": "165436", "species_taxid": "165436", "organism_name": "uncultured Flavobacteriaceae bacterium", "infraspecific_name": "", "isolate": "B3_Bin_METABAT__28_sub_1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/28", "asm_name": "B3_Bin_METABAT__28_sub_1", "submitter": "marine college, shandong university", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/009/735/GCA_938009735.1_B3_Bin_METABAT_28_sub_1", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-28", "dateModified": "2023-01-28", "datePublished": "2023-01-28", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Flavobacteriaceae bacterium" ], "sample_taxid": [ "165436" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "1.135 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3987444", "Number of Sequences": "390", "Longest Sequences (bp)": "76789", "N50 (bp)": "14836", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "35.3", "Number of CDSs": "3153", "Average Protein Length": "325.9", "Coding Ratio (%)": "77.3", "Number of rRNAs": "0", "Number of tRNAs": "29", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Maribacter algarum", "strain": "strain=RZ26", "accession": "GCA_005885635.1", "taxid": 2578118, "species_taxid": 2578118, "relation_to_type": "type", "validated": true, "ani": 78.1083, "matched_fragments": 374, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantibacter crassamenti", "strain": "strain=HG732", "accession": "GCA_016811105.1", "taxid": 1837375, "species_taxid": 1837375, "relation_to_type": "type", "validated": true, "ani": 77.3114, "matched_fragments": 231, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter forsetii", "strain": "strain=DSM 18668", "accession": "GCA_000744105.1", "taxid": 444515, "species_taxid": 444515, "relation_to_type": "type", "validated": true, "ani": 77.263, "matched_fragments": 174, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter arcticus", "strain": "strain=DSM 23546", "accession": "GCA_900167935.1", "taxid": 561365, "species_taxid": 561365, "relation_to_type": "type", "validated": true, "ani": 77.251, "matched_fragments": 181, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter vaceletii", "strain": "strain=DSM 25230", "accession": "GCA_003634105.1", "taxid": 1206816, "species_taxid": 1206816, "relation_to_type": "type", "validated": true, "ani": 77.2409, "matched_fragments": 203, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zobellia barbeyronii", "strain": "strain=KMM 6746", "accession": "GCA_018603515.1", "taxid": 2748009, "species_taxid": 2748009, "relation_to_type": "type", "validated": true, "ani": 77.1949, "matched_fragments": 170, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter hydrothermalis", "strain": "strain=T28", "accession": "GCA_001673755.1", "taxid": 1836467, "species_taxid": 1836467, "relation_to_type": "type", "validated": true, "ani": 77.1252, "matched_fragments": 181, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter hydrothermalis", "strain": "strain=T28", "accession": "GCA_001913155.1", "taxid": 1836467, "species_taxid": 1836467, "relation_to_type": "type", "validated": true, "ani": 77.1122, "matched_fragments": 178, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter aquivivus", "strain": "strain=DSM 16478", "accession": "GCA_900142175.1", "taxid": 228958, "species_taxid": 228958, "relation_to_type": "type", "validated": true, "ani": 77.11, "matched_fragments": 203, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter stanieri", "strain": "strain=DSM 19891", "accession": "GCA_900112245.1", "taxid": 440514, "species_taxid": 440514, "relation_to_type": "type", "validated": true, "ani": 77.0206, "matched_fragments": 216, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter spongiicola", "strain": "strain=DSM 25233", "accession": "GCA_004364165.1", "taxid": 1206753, "species_taxid": 1206753, "relation_to_type": "type", "validated": true, "ani": 76.9953, "matched_fragments": 194, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zobellia roscoffensis", "strain": "strain=Asnod1-F08", "accession": "GCA_015330165.1", "taxid": 2779508, "species_taxid": 2779508, "relation_to_type": "type", "validated": true, "ani": 76.8667, "matched_fragments": 170, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter dokdonensis", "strain": "strain=DSW-8", "accession": "GCA_001447995.1", "taxid": 320912, "species_taxid": 320912, "relation_to_type": "type", "validated": true, "ani": 76.8457, "matched_fragments": 167, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter algicola", "strain": "strain=PoM-212", "accession": "GCA_003933245.1", "taxid": 2498892, "species_taxid": 2498892, "relation_to_type": "type", "validated": true, "ani": 76.8247, "matched_fragments": 71, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulophaga lytica", "strain": "strain=DSM 7489", "accession": "GCA_000190595.1", "taxid": 979, "species_taxid": 979, "relation_to_type": "type", "validated": true, "ani": 76.8211, "matched_fragments": 145, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulophaga algicola", "strain": "strain=DSM 14237", "accession": "GCA_000186265.1", "taxid": 59600, "species_taxid": 59600, "relation_to_type": "type", "validated": true, "ani": 76.7986, "matched_fragments": 177, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter litoralis", "strain": "strain=SDRB-Phe2", "accession": "GCA_003075045.1", "taxid": 2059726, "species_taxid": 2059726, "relation_to_type": "type", "validated": true, "ani": 76.7178, "matched_fragments": 173, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulophaga omnivescoria", "strain": "strain=W5C", "accession": "GCA_001999725.1", "taxid": 1888890, "species_taxid": 1888890, "relation_to_type": "type", "validated": true, "ani": 76.5917, "matched_fragments": 136, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella vidalii", "strain": "strain=HL634", "accession": "GCA_013403955.1", "taxid": 2615024, "species_taxid": 2615024, "relation_to_type": "type", "validated": true, "ani": 76.3552, "matched_fragments": 92, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Joostella atrarenae", "strain": "strain=M1-2", "accession": "GCA_021764745.1", "taxid": 679257, "species_taxid": 679257, "relation_to_type": "type", "validated": true, "ani": 76.173, "matched_fragments": 80, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina pacifica", "strain": "strain=SW150", "accession": "GCA_000520955.1", "taxid": 1296415, "species_taxid": 1296415, "relation_to_type": "type", "validated": true, "ani": 76.0022, "matched_fragments": 72, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera marina", "strain": "strain=NBU2968", "accession": "GCA_019880635.1", "taxid": 2873265, "species_taxid": 2873265, "relation_to_type": "type", "validated": true, "ani": 75.9818, "matched_fragments": 75, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mariniflexile gromovii", "strain": "strain=KCTC 12570", "accession": "GCA_017814435.1", "taxid": 362523, "species_taxid": 362523, "relation_to_type": "type", "validated": true, "ani": 75.9211, "matched_fragments": 72, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter pacificus", "strain": "strain=H164", "accession": "GCA_008033385.1", "taxid": 2599389, "species_taxid": 2599389, "relation_to_type": "type", "validated": true, "ani": 75.9144, "matched_fragments": 76, "total_fragments": 1139, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_005885635.1", "gtdb_species": "s__RZ26 sp005885635", "ani": 78.1216, "matched_fragments": 372, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__RZ26", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003232155.1", "gtdb_species": "s__RZ26 sp003232155", "ani": 77.881, "matched_fragments": 153, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__RZ26", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016811105.1", "gtdb_species": "s__Aurantibacter_A crassamenti", "ani": 77.3114, "matched_fragments": 231, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aurantibacter_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011050675.1", "gtdb_species": "s__Maribacter sp011050675", "ani": 77.2682, "matched_fragments": 196, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003634105.1", "gtdb_species": "s__Maribacter_B vaceletii", "ani": 77.2542, "matched_fragments": 202, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900167935.1", "gtdb_species": "s__Maribacter arcticus", "ani": 77.2355, "matched_fragments": 182, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018861125.1", "gtdb_species": "s__Cellulophaga baltica_A", "ani": 77.1855, "matched_fragments": 184, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016744255.1", "gtdb_species": "s__Maribacter_B sp016744255", "ani": 77.1389, "matched_fragments": 181, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013001935.1", "gtdb_species": "s__Maribacter_A sp013001935", "ani": 77.1367, "matched_fragments": 56, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.76", "min_intra_species_ani": "96.72", "mean_intra_species_af": "0.66", "min_intra_species_af": "0.66", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900142175.1", "gtdb_species": "s__Maribacter aquivivus", "ani": 77.1235, "matched_fragments": 202, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001913155.1", "gtdb_species": "s__Maribacter hydrothermalis", "ani": 77.1122, "matched_fragments": 178, "total_fragments": 1139, "gtdb_taxonomy": 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"d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "98.09", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000621125.1", "gtdb_species": "s__Maribacter antarcticus", "ani": 77.0453, "matched_fragments": 120, "total_fragments": 1139, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000153165.2", "gtdb_species": "s__Maribacter_A sp000153165", "ani": 77.0176, "matched_fragments": 147, "total_fragments": 1139, "gtdb_taxonomy": 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