{
    "type": "genome",
    "identifier": "GCA_938009985.1",
    "organism": "uncultured bacterium",
    "title": "uncultured bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938009985.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14085290",
        "wgs_master": "CALLFU000000000.1",
        "refseq_category": "na",
        "taxid": "77133",
        "species_taxid": "77133",
        "organism_name": "uncultured bacterium",
        "infraspecific_name": "",
        "isolate": "ERR912079_bin.19_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/11",
        "asm_name": "ERR912079_bin.19_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/009/985/GCA_938009985.1_ERR912079_bin.19_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-11",
    "dateModified": "2023-01-11",
    "datePublished": "2023-01-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured bacterium"
        ],
        "sample_taxid": [
            "77133"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "1.229 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4353537",
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        "Longest Sequences (bp)": "460253",
        "N50 (bp)": "119264",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.1",
        "Number of CDSs": "3585",
        "Average Protein Length": "364.8",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Victivallis vadensis",
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                "accession": "GCA_003096415.1",
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                "species_taxid": 172901,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1766,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Victivallis lenta",
                "strain": "strain=BBE-744-WT-12",
                "accession": "GCA_009695545.1",
                "taxid": 2606640,
                "species_taxid": 2606640,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 100,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_900548385.1",
                "gtdb_species": "s__UBA1829 sp900548385",
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                "total_fragments": 1407,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "98.49",
                "mean_intra_species_af": "0.94",
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                "num_clustered_genomes": 3,
                "status": "conclusive"
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                "gtdb_species": "s__UBA1829 sp900760615",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_species": "s__UBA1829 sp002405835",
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                "matched_fragments": 391,
                "total_fragments": 1407,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
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                "gtdb_species": "s__UBA1829 sp900549045",
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                "matched_fragments": 285,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
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                "mean_intra_species_af": "0.85",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_900549415.1",
                "gtdb_species": "s__UBA1829 sp900549415",
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                "matched_fragments": 401,
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                "status": "-"
            },
            {
                "accession": "GCA_002338895.1",
                "gtdb_species": "s__UBA1829 sp002338895",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905197955.1",
                "gtdb_species": "s__UBA1829 sp905197955",
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                "matched_fragments": 296,
                "total_fragments": 1407,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1829",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017456495.1",
                "gtdb_species": "s__SIG79 sp017456495",
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                "matched_fragments": 66,
                "total_fragments": 1407,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__SIG79",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Victivallales",
        "f__UBA1829",
        "g__UBA1829",
        "s__UBA1829 sp900548385"
    ],
    "_genome_taxon": [
        "uncultured",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Victivallales",
        "f__UBA1829",
        "g__UBA1829",
        "s__UBA1829 sp900548385",
        "Bacteria",
        "Verrucomicrobiota",
        "Lentisphaeria",
        "Victivallales",
        "UBA1829",
        "UBA1829",
        "UBA1829",
        "sp900548385"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}