{
    "type": "genome",
    "identifier": "GCA_938010065.1",
    "organism": "uncultured Succiniclasticum sp.",
    "title": "uncultured Succiniclasticum sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938010065.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14085425",
        "wgs_master": "CALLGF000000000.1",
        "refseq_category": "na",
        "taxid": "1500547",
        "species_taxid": "1500547",
        "organism_name": "uncultured Succiniclasticum sp.",
        "infraspecific_name": "",
        "isolate": "ERR912195_bin.93_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/10",
        "asm_name": "ERR912195_bin.93_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/010/065/GCA_938010065.1_ERR912195_bin.93_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-10",
    "dateModified": "2023-01-10",
    "datePublished": "2023-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Succiniclasticum sp."
        ],
        "sample_taxid": [
            "1500547"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.533 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1880228",
        "Number of Sequences": "43",
        "Longest Sequences (bp)": "193241",
        "N50 (bp)": "55992",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.3",
        "Number of CDSs": "1689",
        "Average Protein Length": "332.2",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Acidaminococcus fermentans",
                "strain": "strain=DSM 20731",
                "accession": "GCA_000025305.1",
                "taxid": 905,
                "species_taxid": 905,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7532,
                "matched_fragments": 60,
                "total_fragments": 604,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Succiniclasticum ruminis",
                "strain": "strain=DSM 9236",
                "accession": "GCA_900112895.1",
                "taxid": 40841,
                "species_taxid": 40841,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.5722,
                "matched_fragments": 112,
                "total_fragments": 604,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900314855.1",
                "gtdb_species": "s__Succiniclasticum sp900314855",
                "ani": 99.521,
                "matched_fragments": 557,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.45",
                "min_intra_species_ani": "99.15",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900315805.1",
                "gtdb_species": "s__Succiniclasticum sp900315805",
                "ani": 82.2244,
                "matched_fragments": 417,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.83",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900316935.1",
                "gtdb_species": "s__Succiniclasticum sp900316935",
                "ani": 81.6331,
                "matched_fragments": 398,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.76",
                "min_intra_species_ani": "99.29",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCA_017460905.1",
                "gtdb_species": "s__Succiniclasticum sp017460905",
                "ani": 77.6621,
                "matched_fragments": 111,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.67",
                "min_intra_species_ani": "97.67",
                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900544275.1",
                "gtdb_species": "s__Succiniclasticum sp900544275",
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                "matched_fragments": 66,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.62",
                "min_intra_species_ani": "98.55",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017554485.1",
                "gtdb_species": "s__Succiniclasticum sp017554485",
                "ani": 77.4532,
                "matched_fragments": 93,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905235335.1",
                "gtdb_species": "s__Succiniclasticum sp905235335",
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                "matched_fragments": 97,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017405945.1",
                "gtdb_species": "s__Succiniclasticum sp017405945",
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                "matched_fragments": 104,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succiniclasticum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009696675.1",
                "gtdb_species": "s__Acidaminococcus sp000437815",
                "ani": 76.6653,
                "matched_fragments": 50,
                "total_fragments": 604,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.16",
                "min_intra_species_ani": "97.76",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.523,
        "cell_length": 0.255,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 2720180.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Acidaminococcales",
        "f__Acidaminococcaceae",
        "g__Succiniclasticum",
        "s__Succiniclasticum sp900314855"
    ],
    "_genome_taxon": [
        "uncultured",
        "Succiniclasticum",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Acidaminococcales",
        "f__Acidaminococcaceae",
        "g__Succiniclasticum",
        "s__Succiniclasticum sp900314855",
        "Bacteria",
        "Bacillota",
        "C",
        "Negativicutes",
        "Acidaminococcales",
        "Acidaminococcaceae",
        "Succiniclasticum",
        "Succiniclasticum",
        "sp900314855"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}