{ "type": "genome", "identifier": "GCA_938014105.1", "organism": "uncultured Paenibacillus sp.", "title": "uncultured Paenibacillus sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "European Bioinformatics Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_938014105.1", "bioproject": "PRJEB51075", "biosample": "SAMEA14084168", "wgs_master": "CALLSO000000000.1", "refseq_category": "na", "taxid": "227322", "species_taxid": "227322", "organism_name": "uncultured Paenibacillus sp.", "infraspecific_name": "", "isolate": "ERR3160560_bin.23_CONCOCT_v1.1_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/01/12", "asm_name": "ERR3160560_bin.23_CONCOCT_v1.1_MAG", "submitter": "European Bioinformatics Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/014/105/GCA_938014105.1_ERR3160560_bin.23_CONCOCT_v1.1_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-01-12", "dateModified": "2023-01-12", "datePublished": "2023-01-12", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Paenibacillus sp." ], "sample_taxid": [ "227322" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "1.510 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 75.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5277138", "Number of Sequences": "490", "Longest Sequences (bp)": "70711", "N50 (bp)": "16658", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.2", "Number of CDSs": "4992", "Average Protein Length": "277.5", "Coding Ratio (%)": "78.8", "Number of rRNAs": "0", "Number of tRNAs": "50", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Oceanobacillus profundus", "strain": "strain=CL-MP28", "accession": "GCA_008087205.1", "taxid": 372463, "species_taxid": 372463, "relation_to_type": "type", "validated": true, "ani": 99.4605, "matched_fragments": 1190, "total_fragments": 1515, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Oceanobacillus profundus", "strain": "strain=DSM 18246", "accession": "GCA_003515705.1", "taxid": 372463, "species_taxid": 372463, "relation_to_type": "type", "validated": true, "ani": 99.4595, "matched_fragments": 1190, "total_fragments": 1515, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Oceanobacillus polygoni", "strain": "strain=SA9", "accession": "GCA_008304605.1", "taxid": 1235259, "species_taxid": 1235259, "relation_to_type": "type", "validated": true, "ani": 87.8222, "matched_fragments": 1014, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus damuensis", "strain": "strain=PT-20", "accession": "GCA_001618145.1", "taxid": 937928, "species_taxid": 937928, "relation_to_type": "type", "validated": true, "ani": 78.0867, "matched_fragments": 269, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus rekensis", "strain": "strain=PT-11", "accession": "GCA_002153375.1", "taxid": 937927, "species_taxid": 937927, "relation_to_type": "type", "validated": true, "ani": 78.0373, "matched_fragments": 266, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus zhaokaii", "strain": "strain=160", "accession": "GCA_003352005.1", "taxid": 2052660, "species_taxid": 2052660, "relation_to_type": "type", "validated": true, "ani": 77.7103, "matched_fragments": 186, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus jordanicus", "strain": "strain=GSFE11", "accession": "GCA_022095695.1", "taxid": 2867266, "species_taxid": 2867266, "relation_to_type": "type", "validated": true, "ani": 77.4724, "matched_fragments": 131, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus bengalensis", "strain": "strain=MCCC 1K00260", "accession": "GCA_003628445.1", "taxid": 1435466, "species_taxid": 1435466, "relation_to_type": "type", "validated": true, "ani": 77.4719, "matched_fragments": 176, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus iheyensis", "strain": "strain=HTE831", "accession": "GCA_000011245.1", "taxid": 182710, "species_taxid": 182710, "relation_to_type": "type", "validated": true, "ani": 77.4001, "matched_fragments": 161, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus salinisoli", "strain": "strain=YIM B00359", "accession": "GCA_009733865.1", "taxid": 2678611, "species_taxid": 2678611, "relation_to_type": "type", "validated": true, "ani": 77.16, "matched_fragments": 169, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus neutriphilus", "strain": "strain=CGMCC 1.7693", "accession": "GCA_014645515.1", "taxid": 531815, "species_taxid": 531815, "relation_to_type": "type", "validated": true, "ani": 77.1284, "matched_fragments": 140, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus halophilus", "strain": "strain=DSM 23996", "accession": "GCA_003628505.1", "taxid": 930130, "species_taxid": 930130, "relation_to_type": "type", "validated": true, "ani": 76.8894, "matched_fragments": 141, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanobacillus sojae", "strain": "strain=NBRC 105379", "accession": "GCA_007991515.1", "taxid": 582851, "species_taxid": 582851, "relation_to_type": "type", "validated": true, "ani": 76.8362, "matched_fragments": 143, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentibacillus amyloliquefaciens", "strain": "strain=LAM0015", "accession": "GCA_001307805.2", "taxid": 1472767, "species_taxid": 1472767, "relation_to_type": "type", "validated": true, "ani": 76.5921, "matched_fragments": 55, "total_fragments": 1515, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 75.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, 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