<?xml version="1.0" ?>
<BioSampleSet><BioSample access="public" publication_date="2023-01-03T00:00:00.000" last_update="2023-04-12T12:05:25.000" submission_date="2023-01-04T08:32:17.946" id="32562425" accession="SAMEA14085799">   <Ids>     <Id db="BioSample" is_primary="1">SAMEA14085799</Id>     <Id db="SRA">ERS11688930</Id>   </Ids>   <Description>     <Title>Metagenome-assembled genome: SRR5091460_bin.45_CONCOCT_v1.1_MAG</Title>     <Organism taxonomy_id="244328" taxonomy_name="uncultured Clostridia bacterium">       <OrganismName>uncultured Clostridia bacterium</OrganismName>     </Organism>     <Comment>       <Paragraph>This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR5091460 of study SRP094805.</Paragraph>     </Comment>   </Description>   <Owner>     <Name>EBI</Name>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="ENA-CHECKLIST">ERC000047</Attribute>     <Attribute attribute_name="ENA-FIRST-PUBLIC">2023-01-03</Attribute>     <Attribute attribute_name="ENA-LAST-UPDATE">2023-01-03</Attribute>     <Attribute attribute_name="External Id">SAMEA14085799</Attribute>     <Attribute attribute_name="INSDC center alias">EBI</Attribute>     <Attribute attribute_name="INSDC center name">European Bioinformatics Institute</Attribute>     <Attribute attribute_name="INSDC first public">2023-01-03T00:33:46Z</Attribute>     <Attribute attribute_name="INSDC last update">2023-01-03T00:33:46Z</Attribute>     <Attribute attribute_name="INSDC status">public</Attribute>     <Attribute attribute_name="Submitter Id">SRR5091460_bin.45_CONCOCT_v1.1_MAG</Attribute>     <Attribute attribute_name="assembly quality">Many fragments with little to no review of assembly other than reporting of standard assembly statistics</Attribute>     <Attribute attribute_name="assembly software">metaspadesv3.11.1</Attribute>     <Attribute attribute_name="binning parameters">Default</Attribute>     <Attribute attribute_name="binning software">CONCOCT v1.1</Attribute>     <Attribute attribute_name="broker name">EMG broker account, EMBL-EBI</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">2015-10-01</Attribute>     <Attribute attribute_name="completeness score">99.78</Attribute>     <Attribute attribute_name="completeness software">CheckM</Attribute>     <Attribute attribute_name="contamination score">0.67</Attribute>     <Attribute attribute_name="environment (biome)" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">Host-associated</Attribute>     <Attribute attribute_name="environment (feature)" harmonized_name="env_local_scale" display_name="local-scale environmental context">Human</Attribute>     <Attribute attribute_name="environment (material)" harmonized_name="env_medium" display_name="environmental medium">Digestive system</Attribute>     <Attribute attribute_name="geographic location (country and/or sea)" harmonized_name="geo_loc_name" display_name="geographic location">China</Attribute>     <Attribute attribute_name="geographic location (latitude)">30.3</Attribute>     <Attribute attribute_name="geographic location (longitude)">120.2</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">metagenome-assembled genome</Attribute>     <Attribute attribute_name="isolation_source" harmonized_name="isolation_source" display_name="isolation source">human gut metagenome</Attribute>     <Attribute attribute_name="metagenomic source">human gut metagenome</Attribute>     <Attribute attribute_name="project name" harmonized_name="project_name" display_name="project name">Gut microbiome make contributions to human host, and intestinal dysbiosis is associated with rheumatoid arthritis. Here we firstly demonstrated that the human gut microbiome related to rheumatoid arthritis could be divided into subtyping groups under different human enterotypes, which indicate the associations between rheumatoid arthritis and gut microbiome were diverse. In rheumatoid arthritis-related microbiota, Prevotella could be an indicator of early rheumatoid arthritis patients but insufficient to differentiate RA patients from healthy controls, and Bacteroides coprocola enriched in group 3 and Bacteroides dorei enriched in group 4 were considered to be as indicators of serious rheumatoid arthritis patients. Our findings provide additional evidences supporting that rheumatoid arthritis is a heterogeneous disease. Thus, the study of association between disease and gut microbiome should be conducted under different human gut enterotypes.</Attribute>     <Attribute attribute_name="sample derived from">SAMN06112090</Attribute>     <Attribute attribute_name="sample name" harmonized_name="sample_name" display_name="sample name">SRR5091460_bin.45_CONCOCT_v1.1_MAG</Attribute>     <Attribute attribute_name="scientific_name">uncultured Clostridia bacterium</Attribute>     <Attribute attribute_name="sequencing method">Illumina HiSeq 2000</Attribute>     <Attribute attribute_name="taxonomic identity marker">multi-marker approach</Attribute>   </Attributes>   <Status status="live" when="2023-01-05T08:30:13.510"/> </BioSample> </BioSampleSet>
