{
    "type": "genome",
    "identifier": "GCA_938016395.1",
    "organism": "uncultured Prevotella sp.",
    "title": "uncultured Prevotella sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938016395.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14084316",
        "wgs_master": "CALILI000000000.1",
        "refseq_category": "na",
        "taxid": "159272",
        "species_taxid": "159272",
        "organism_name": "uncultured Prevotella sp.",
        "infraspecific_name": "",
        "isolate": "ERR414274_bin.56_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/10",
        "asm_name": "ERR414274_bin.56_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/016/395/GCA_938016395.1_ERR414274_bin.56_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-10",
    "dateModified": "2023-01-10",
    "datePublished": "2023-01-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotella sp."
        ],
        "sample_taxid": [
            "159272"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.815 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2843896",
        "Number of Sequences": "197",
        "Longest Sequences (bp)": "98325",
        "N50 (bp)": "21977",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.7",
        "Number of CDSs": "2182",
        "Average Protein Length": "350.0",
        "Coding Ratio (%)": "80.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "28",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Prevotella lascolaii",
                "strain": "strain=khD1",
                "accession": "GCA_900079775.1",
                "taxid": 1776379,
                "species_taxid": 1776379,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.089,
                "matched_fragments": 116,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylanibacter rodentium",
                "strain": "strain=PROD",
                "accession": "GCA_013166575.1",
                "taxid": 2736289,
                "species_taxid": 2736289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0057,
                "matched_fragments": 96,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella stercorea",
                "strain": "strain=DSM 18206",
                "accession": "GCA_000235885.1",
                "taxid": 363265,
                "species_taxid": 363265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.8844,
                "matched_fragments": 108,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella buccae",
                "strain": "strain=ATCC 33574",
                "accession": "GCA_000184945.1",
                "taxid": 28126,
                "species_taxid": 28126,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8026,
                "matched_fragments": 92,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallella seregens",
                "strain": "strain=ATCC 51272",
                "accession": "GCA_000518545.1",
                "taxid": 52229,
                "species_taxid": 52229,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7617,
                "matched_fragments": 112,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=JCM 13447",
                "accession": "GCA_000613565.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7097,
                "matched_fragments": 96,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella dentalis",
                "strain": "strain=DSM 3688",
                "accession": "GCA_000242335.3",
                "taxid": 52227,
                "species_taxid": 52227,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7069,
                "matched_fragments": 111,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella baroniae",
                "strain": "strain=DSM 16972",
                "accession": "GCA_000426585.1",
                "taxid": 305719,
                "species_taxid": 305719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6568,
                "matched_fragments": 98,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella dentalis",
                "strain": "strain=DSM 3688",
                "accession": "GCA_000220215.1",
                "taxid": 52227,
                "species_taxid": 52227,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6451,
                "matched_fragments": 111,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallella faecis",
                "strain": "strain=CLA-AA-H145",
                "accession": "GCA_018789675.1",
                "taxid": 2841596,
                "species_taxid": 2841596,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3294,
                "matched_fragments": 100,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella denticola",
                "strain": "strain=NCTC13067",
                "accession": "GCA_900454835.1",
                "taxid": 28129,
                "species_taxid": 28129,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1379,
                "matched_fragments": 74,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella denticola",
                "strain": "strain=DSM 20614",
                "accession": "GCA_000421205.1",
                "taxid": 28129,
                "species_taxid": 28129,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0936,
                "matched_fragments": 73,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella lacticifex",
                "strain": "strain=R5019",
                "accession": "GCA_019973375.1",
                "taxid": 2854755,
                "species_taxid": 2854755,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0841,
                "matched_fragments": 58,
                "total_fragments": 847,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_905196835.1",
                "gtdb_species": "s__Prevotella stercoripullorum",
                "ani": 95.9296,
                "matched_fragments": 709,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.53",
                "min_intra_species_ani": "95.99",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900554545.1",
                "gtdb_species": "s__Prevotella sp900554545",
                "ani": 85.0319,
                "matched_fragments": 459,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.93",
                "min_intra_species_ani": "97.89",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900551055.1",
                "gtdb_species": "s__Prevotella sp900551055",
                "ani": 83.8461,
                "matched_fragments": 539,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.16",
                "min_intra_species_ani": "98.15",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_905211345.1",
                "gtdb_species": "s__Prevotella sp905211345",
                "ani": 83.3155,
                "matched_fragments": 295,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900550365.1",
                "gtdb_species": "s__Prevotella sp900550365",
                "ani": 80.3291,
                "matched_fragments": 380,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000433175.1",
                "gtdb_species": "s__Prevotella sp000433175",
                "ani": 80.2839,
                "matched_fragments": 319,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.10",
                "min_intra_species_ani": "97.93",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_016899855.1",
                "gtdb_species": "s__Prevotella sp000436595",
                "ani": 80.2474,
                "matched_fragments": 397,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.00",
                "min_intra_species_ani": "97.50",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_000436695.1",
                "gtdb_species": "s__Prevotella sp000436695",
                "ani": 77.5446,
                "matched_fragments": 223,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.96",
                "min_intra_species_ani": "98.24",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_905216025.1",
                "gtdb_species": "s__Prevotella sp905216025",
                "ani": 77.4404,
                "matched_fragments": 169,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.83",
                "min_intra_species_ani": "95.83",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900545525.1",
                "gtdb_species": "s__Prevotella sp900545525",
                "ani": 77.1246,
                "matched_fragments": 150,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.81",
                "min_intra_species_ani": "98.33",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_004557285.1",
                "gtdb_species": "s__Prevotella sp004557285",
                "ani": 77.0602,
                "matched_fragments": 131,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.35",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_013166515.1",
                "gtdb_species": "s__Prevotella sp013166515",
                "ani": 76.818,
                "matched_fragments": 137,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.36",
                "min_intra_species_ani": "96.74",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900770845.1",
                "gtdb_species": "s__Prevotella sp900770845",
                "ani": 76.6379,
                "matched_fragments": 102,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004558865.1",
                "gtdb_species": "s__Prevotella sp004558865",
                "ani": 76.6156,
                "matched_fragments": 106,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.226,
        "cell_length": 0.114,
        "doubling_h": null,
        "growth_tmp": 36.755,
        "optimum_tmp": 35.219,
        "optimum_ph": 7.109,
        "genome_size": 3037444.691,
        "gc_content": 45.137,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.975,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.025,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella stercoripullorum"
    ],
    "_genome_taxon": [
        "uncultured",
        "Prevotella",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella stercoripullorum",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "stercoripullorum"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}