{
    "type": "genome",
    "identifier": "GCA_938020375.1",
    "organism": "Colibacter massiliensis",
    "title": "Colibacter massiliensis",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "European Bioinformatics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_938020375.1",
        "bioproject": "PRJEB51075",
        "biosample": "SAMEA14084407",
        "wgs_master": "CALHDF000000000.1",
        "refseq_category": "na",
        "taxid": "1852379",
        "species_taxid": "1852379",
        "organism_name": "Colibacter massiliensis",
        "infraspecific_name": "",
        "isolate": "ERR414475_bin.6_CONCOCT_v1.1_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2023/01/09",
        "asm_name": "ERR414475_bin.6_CONCOCT_v1.1_MAG",
        "submitter": "European Bioinformatics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/020/375/GCA_938020375.1_ERR414475_bin.6_CONCOCT_v1.1_MAG",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2023-01-09",
    "dateModified": "2023-01-09",
    "datePublished": "2023-01-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Colibacter massiliensis"
        ],
        "sample_taxid": [
            "1852379"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain"
        ],
        "sample_host_location_id": [],
        "data_size": "0.511 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1791590",
        "Number of Sequences": "21",
        "Longest Sequences (bp)": "360315",
        "N50 (bp)": "136006",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.9",
        "Number of CDSs": "1702",
        "Average Protein Length": "316.2",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 1852379,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Megasphaera massiliensis",
                "strain": "strain=NP3",
                "accession": "GCA_000455225.1",
                "taxid": 1232428,
                "species_taxid": 1232428,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Megasphaera stantonii",
                "strain": "strain=AJH120",
                "accession": "GCA_003367905.1",
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                "species_taxid": 2144175,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3578,
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                "total_fragments": 587,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Megasphaera stantonii",
                "strain": "strain=AJH120",
                "accession": "GCA_003030445.1",
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                "species_taxid": 2144175,
                "relation_to_type": "type",
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                "ani": 77.3151,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Megasphaera cerevisiae",
                "strain": "strain=DSM 20462",
                "accession": "GCA_900167325.1",
                "taxid": 39029,
                "species_taxid": 39029,
                "relation_to_type": "type",
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                "ani": 76.9854,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Megasphaera cerevisiae",
                "strain": "strain=DSM 20462",
                "accession": "GCA_001045675.1",
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                "species_taxid": 39029,
                "relation_to_type": "type",
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                "ani": 76.8829,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Megasphaera elsdenii",
                "strain": "strain=DSM 20460",
                "accession": "GCA_000283495.2",
                "taxid": 907,
                "species_taxid": 907,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8291,
                "matched_fragments": 105,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Megasphaera elsdenii",
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                "accession": "GCA_003010495.1",
                "taxid": 907,
                "species_taxid": 907,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_900095855.1",
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                "min_intra_species_ani": "98.79",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCF_000239275.1",
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                "mean_intra_species_ani": "98.83",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000165735.1",
                "gtdb_species": "s__Anaeroglobus micronuciformis",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Anaeroglobus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.87",
                "min_intra_species_ani": "97.00",
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                "num_clustered_genomes": 14,
                "status": "-"
            },
            {
                "accession": "GCF_000455225.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera",
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                "accession": "GCF_003367905.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera",
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                "mean_intra_species_ani": "100.00",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902388315.1",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
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        "growth_tmp": null,
        "optimum_tmp": null,
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        "genome_size": null,
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        "rRNA16S_genes": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Veillonellales",
        "f__Megasphaeraceae",
        "g__Anaeroglobus",
        "s__Anaeroglobus massiliensis"
    ],
    "_genome_taxon": [
        "Colibacter",
        "massiliensis",
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Veillonellales",
        "f__Megasphaeraceae",
        "g__Anaeroglobus",
        "s__Anaeroglobus massiliensis",
        "Bacteria",
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        "C",
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        "Veillonellales",
        "Megasphaeraceae",
        "Anaeroglobus",
        "Anaeroglobus",
        "massiliensis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}